1L5I
30-CONFORMER NMR ENSEMBLE OF THE N-TERMINAL, DNA-BINDING DOMAIN OF THE REPLICATION INITIATION PROTEIN FROM A GEMINIVIRUS (TOMATO YELLOW LEAF CURL VIRUS-SARDINIA)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
2 | 3D_15N-SEPARATED_NOESY | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
3 | HNHA | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
4 | HNHB | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
5 | 4D_13C/15N-SEPARATED_NOESY | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
6 | 2D HNCOCG AROM | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
7 | 2D HNCO AROM | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
8 | 4D 13C,13C NOESY | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 500 |
2 | Bruker | DMX | 600 |
4 | Bruker | DMX | 750 |
5 | Bruker | DRX | 800 |
NMR Refinement | ||
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Method | Details | Software |
TORSION ANGLE SIMULATED ANHEALING | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | |
Conformers Calculated Total Number | |
Conformers Submitted Total Number | 30 |
Additional NMR Experimental Information | |
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Details | THIS ENTRY CONTAINS THE 30-CONFORMER ENSEMBLE. THE MINIMIZED AVERAGE STRUCTURE OF THIS ENSEMBLE HAS BEEN DEPOSITED UNDER CODE 1L2M, AND IT IS A GOOD REPRESENTATION OF THE 30-CONFORMER ENSEMBLE CONTAINED HERE. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | ||
2 | data analysis | NMRView | 4.1.1 | |
3 | data analysis | TALOS | ||
4 | structure solution | DYANA | ||
5 | refinement | DYANA |