1L1W

NMR structure of a SRP19 binding domain in human SRP RNA


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY0.5mM RNA fragment; 20mM phosphate buffer NA; 95% H2O, 5% D2O95% H2O/5% D2O50mM NaCl6.5ambient298
22D NOESY0.5mM RNA fragment; 20mM phosphate buffer NA; 100% D2O100% D2O50mM NaCl6.5ambient298
32D HNN-COSY0.5mM RNA fragment U-15N,13C-Guanosine,Cytidine; 20mM phosphate buffer NA; 95% H2O, 5% D2O95% H2O/5% D2O50mM NaCl6.5ambient298
42D half filtered NOESY0.5mM RNA fragment U-15N,13C-Guanosine,Cytidine; 20mM phosphate buffer NA; 100% D2O100% D2O50mM NaCl6.5ambient298
52D half filtered NOESY0.5mM RNA fragment U-15N,13C-Guanosine,Uridine; 20mM phosphate buffer NA; 100% D2O100% D2O50mM NaCl6.5ambient298
62D half filtered NOESY0.5mM RNA fragment U-15N,13C-Adenosine,Cytidine; 20mM phosphate buffer NA; 100% D2O100% D2O50mM NaCl6.5ambient298
7DQF-COSY0.5mM RNA fragment; 20mM phosphate buffer NA; 95% H2O, 5% D2O95% H2O/5% D2O50mM NaCl6.5ambient298
82D HP-COSY0.5mM RNA fragment; 20mM phosphate buffer NA; 95% H2O, 5% D2O95% H2O/5% D2O50mM NaCl6.5ambient298
92D TOCSY0.5mM RNA fragment; 20mM phosphate buffer NA; 95% H2O, 5% D2O95% H2O/5% D2O50mM NaCl6.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2VarianINOVA800
NMR Refinement
MethodDetailsSoftware
simulated annealingXwinNMR
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number1
Representative Model (minimized average structure)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.1
2collectionVNMR6.1B
3data analysisFelix97.0
4structure solutionDiscover97.0
5refinementDiscoverBIOSYM