1G2T
SOLUTION STRUCTURE OF EOTAXIN-3
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 2 mM eotaxin-3,U-15N, 20mM sodium acetate (deteurated), 90% H2O, 10% D2O | 90% H2O/10% D2O | 20 mM | 5 | ambient | 303 | |
2 | HNHA | 2 mM eotaxin-3,U-15N, 20mM sodium acetate (deteurated), 90% H2O, 10% D2O | 90% H2O/10% D2O | 20 mM | 5 | ambient | 303 | |
3 | 13C, 15N simultaneously edited NOESY | 2 mM eotaxin-3,U-15N, 13C, 20mM sodium acetate (deteurated), 90% H2O, 10% D2O | 90% H2O/10% D2O | 20 mM | 5 | ambient | 303 | |
4 | 3D_13C-separated_NOESY | 2 mM eotaxin-3,U-15N, 13C, 20mM sodium acetate (deteurated), 90% H2O, 10% D2O | 100% D2O | 20 mM | 5 | ambient | 303 | |
5 | 13C-edited HSQC | 0.5 mM eotaxin-3,10% 13C-labeled, 20mM sodium acetate (deteurated) | 100% D2O | 20 mM | 5 | ambient | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITY | 500 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry-simulated annealing protocol implemented in XPLOR | The structures are based on a total of 1250 restraints, 1157 are NOE-derived distance constraints, 69 dihedral angle restraints, 17 distance restraints from hydrogn bonds. | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | PDB ID 1G2S (minimized average structure) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR | XPLOR98.1 | Brunger |
2 | data analysis | Felix | Felix98 | msi industry |
3 | collection | VNMR | VNMR6.1 | Varian |
4 | structure solution | Procheck-nmr | PROCHECK v.3 | laskowski |
5 | refinement | Procheck-nmr | PROCHECK v.3 | laskowski |