1DC8

STRUCTURE OF A TRANSIENTLY PHOSPHORYLATED "SWITCH" IN BACTERIAL SIGNAL TRANSDUCTION


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-SEPARATED_NOESY0.3 MM NTRC(1-124) U-15N; 200 MM SODIUM PHOSPHATE, PH 6.75; 50 MM MAGNESIUM CHLORIDE; 200 MM CARBAMOYLPHOSPHATE250-500 mM6.751 atm298
23D_13C-SEPARATED_NOESY0.3 MM NTRC(1-124) U-15N,13C; 200 MM SODIUM PHOSPHATE, PH 6.75; 50 MM MAGNESIUM CHLORIDE; 200 MM CARBAMOYLPHOSPHATE250-500 mM6.751 atm298
32D NOESY0.3 MM NTRC(1-124) U-15N; 200 MM SODIUM PHOSPHATE, PH 6.75; 50 MM MAGNESIUM CHLORIDE; 200 MM CARBAMOYLPHOSPHATE250-500 mM6.751 atm298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX600
2BrukerDMX750
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsSTRUCTURE BASED ON A TOTAL OF 1301 UNIQUE DISTANCE CONSTRAINTS (OBTAINED FROM 3095 NOE CROSSPEAKS), INCLUDING 374 INTRARESIDUE, 405 SHORT-RANGE, 228 MEDIUM RANGE AND 294 LONG-RANGE CONSTRAINTS. DYANA 1.5 ANNEAL COMMAND (10000 STEPS) USED TO GENERATE 40 CONFORMERS. 20 LOWEST TARGET FUNCTION STRUCTURES ANALYZED. CONFORMER 4 CHOSEN FOR DEPOSITION AS CLOSEST TO MEAN COORDINATES OF THE ENSEMBLE.DYANA
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number1
Representative Model (closest to the average)
Additional NMR Experimental Information
DetailsPHOSPHORYLATION (>95%) COULD BE MAINTAINED FOR 36 HR. TO OBTAIN SUFFICIENT S/N IN 3D NOESY EXPERIMENTS, MULTIPLE (TYPICALLY 4) COMPLETE 3D DATASETS WERE ACQUIRED ON FRESHLY PREPARED SAMPLES AND THEN COADDED TO YIELD HIGH-QUALITY DATASETS FOR STRUCTURE DETERMINATION.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionDYANA1.5PETER GUENTERT
2processingFelix95.0MSI
3collectionXwinNMR1.5BRUKER
4data analysisDYANA1.5PETER GUENTERT
5data analysisXEASY1.3.13MUMENTHALER
6refinementDYANA1.5PETER GUENTERT