1CBV

AN AUTOANTIBODY TO SINGLE-STRANDED DNA: COMPARISON OF THE THREE-DIMENSIONAL STRUCTURES OF THE UNLIGANDED FAB AND A DEOXYNUCLEOTIDE-FAB COMPLEX


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.3647.97

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 63.5α = 90
b = 99.2β = 95.3
c = 36.6γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray MSINGLE WAVELENGTH

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION2.66677590.1910.191
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor29
p_staggered_tor23
p_planar_tor5.6
p_multtor_nbd0.243
p_xhyhbond_nbd0.227
p_singtor_nbd0.19
p_chiral_restr0.155
x_bond_d_na0.033
p_angle_d0.033
p_planar_d0.026
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor29
p_staggered_tor23
p_planar_tor5.6
p_multtor_nbd0.243
p_xhyhbond_nbd0.227
p_singtor_nbd0.19
p_chiral_restr0.155
x_bond_d_na0.033
p_angle_d0.033
p_planar_d0.026
x_bond_d0.018
p_bond_d0.018
p_plane_restr0.011
x_bond_d_prot
x_angle_d
x_angle_d_na
x_angle_d_prot
x_angle_deg
x_angle_deg_na
x_angle_deg_prot
x_dihedral_angle_d
x_dihedral_angle_d_na
x_dihedral_angle_d_prot
x_improper_angle_d
x_improper_angle_d_na
x_improper_angle_d_prot
x_mcbond_it
x_mcangle_it
x_scbond_it
x_scangle_it
p_angle_deg
p_hb_or_metal_coord
p_mcbond_it
p_mcangle_it
p_scbond_it
p_scangle_it
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3347
Nucleic Acid Atoms61
Solvent Atoms
Heterogen Atoms

Software

Software
Software NamePurpose
X-PLORrefinement
PROLSQrefinement