9WGA

2.2 ANGSTROMS RESOLUTION STRUCTURE ANALYSIS OF TWO REFINED N-ACETYLNEURAMINYLLACTOSE-WHEAT GERM AGGLUTININ ISOLECTIN COMPLEXES

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d9wgaa1	Small proteins	Knottins (small inhibitors, toxins, lectins)	Plant lectins/antimicrobial peptides	Hevein-like agglutinin (lectin) domain	Wheat germ agglutinin (WGA)	bread wheat (Triticum aestivum ) [TaxId: 4565 ],	SCOPe (2.08)
B	d9wgab1	Small proteins	Knottins (small inhibitors, toxins, lectins)	Plant lectins/antimicrobial peptides	Hevein-like agglutinin (lectin) domain	Wheat germ agglutinin (WGA)	bread wheat (Triticum aestivum ) [TaxId: 4565 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Hevein-like agglutinin (lectin) domain	8025642	4003041	SCOP2 (2022-06-29)
A	SCOP2 Family	Hevein-like agglutinin (lectin) domain	8025644	4003041	SCOP2 (2022-06-29)
A	SCOP2 Family	Hevein-like agglutinin (lectin) domain	8025647	4003041	SCOP2 (2022-06-29)
A	SCOP2 Family	Hevein-like agglutinin (lectin) domain	8025649	4003041	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Plant lectins/antimicrobial peptides	8038021	3000195	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Plant lectins/antimicrobial peptides	8038023	3000195	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Plant lectins/antimicrobial peptides	8038026	3000195	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Plant lectins/antimicrobial peptides	8038028	3000195	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Plant lectins/antimicrobial peptides	8038028	3000195	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Plant lectins/antimicrobial peptides	8038021	3000195	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Plant lectins/antimicrobial peptides	8038023	3000195	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Plant lectins/antimicrobial peptides	8038026	3000195	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Chitin_bind_1	e9wgaA1	A: few secondary structure elements	X: omega toxin-like	H: omega toxin-related	T: Plant lectins/antimicrobial peptides	F: Chitin_bind_1	ECOD (1.6)
B	Chitin_bind_1	e9wgaB1	A: few secondary structure elements	X: omega toxin-like	H: omega toxin-related	T: Plant lectins/antimicrobial peptides	F: Chitin_bind_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.60.10	Alpha Beta	2-Layer Sandwich	Wheat Germ Agglutinin (Isolectin 2)	domain 1	CATH (4.3.0)
B	3.30.60.10	Alpha Beta	2-Layer Sandwich	Wheat Germ Agglutinin (Isolectin 2)	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00187	Chitin recognition protein (Chitin_bind_1)	Chitin recognition protein	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	WHEAT GERM LECTIN	binding carbohydrate binding chitin binding carbohydrate derivative binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR001002	Chitin-binding, type 1	Domain
A, B	IPR018371	Chitin-binding, type 1, conserved site	Conserved Site
A, B	IPR036861	Endochitinase-like superfamily	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B	PCA	Parent Component: GLN RESID: AA0031 PSI-MOD : 2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.