8P2K

Ternary complex of translating ribosome, NAC and METAP1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
L [auth BI]SCOP2B SuperfamilyRibosomal protein L16p/L10e8097320 3000884 SCOP2B (2022-06-29)
M [auth BJ]SCOP2B SuperfamilyRL5-like8073894 3001709 SCOP2B (2022-06-29)
Q [auth BN]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082477 3000210 SCOP2B (2022-06-29)
S [auth BP]SCOP2B SuperfamilyRibosomal protein L228097828 3001078 SCOP2B (2022-06-29)
U [auth BR]SCOP2B SuperfamilyRibosomal protein L19 (L19e)8107568 3000890 SCOP2B (2022-06-29)
X [auth BU]SCOP2B Superfamily60S Ribosomal protein L22e8061156 3002158 SCOP2B (2022-06-29)
Y [auth BV]SCOP2B Superfamily50S Ribosomal protein L14-like8072048 3000433 SCOP2B (2022-06-29)
AA [auth BX]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095966 3000210 SCOP2B (2022-06-29)
BA [auth BY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076754 3000334 SCOP2B (2022-06-29)
CA [auth BZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053047 3000334 SCOP2B (2022-06-29)
DA [auth Ba]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8097818 3001045 SCOP2B (2022-06-29)
FA [auth Bc]SCOP2B SuperfamilyL30e-like8094953 3001739 SCOP2B (2022-06-29)
HA [auth Be]SCOP2B SuperfamilyRibosomal protein L32e8102090 3000982 SCOP2B (2022-06-29)
IA [auth Bf]SCOP2B SuperfamilyTranslational proteins8093714 3000811 SCOP2B (2022-06-29)
JA [auth Bg]SCOP2B SuperfamilyRibosomal protein L34e-like8103328 3002203 SCOP2B (2022-06-29)
LA [auth Bi]SCOP2B SuperfamilyRibosomal protein L36e8053119 3002161 SCOP2B (2022-06-29)
NA [auth Bk]SCOP2B SuperfamilyRibosomal L38e protein-like8093716 3002206 SCOP2B (2022-06-29)
OA [auth Bl]SCOP2B SuperfamilyRibosomal protein L39e8095597 3001756 SCOP2B (2022-06-29)
RA [auth Bp]SCOP2B SuperfamilyZn-binding ribosomal proteins8101435 3001320 SCOP2B (2022-06-29)
VA [auth Bv]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like8065344 3001911 SCOP2B (2022-06-29)
WA [auth MA]SCOP2B SuperfamilyCreatinase/aminopeptidase catalytic domain-like8098746 3000126 SCOP2B (2022-06-29)
E [auth BB]SCOP2B SuperfamilyTranslational proteins8078357 3000811 SCOP2B (2022-06-29)
BB [auth AB]SCOP2B SuperfamilyNucleic acid-binding proteins8095265 3000135 SCOP2B (2022-06-29)
DB [auth AD]SCOP2B SuperfamilyRibosomal protein S30e-like8053455 3002190 SCOP2B (2022-06-29)
FB [auth AF]SCOP2B SuperfamilyWD40 repeat-like8097816 3001694 SCOP2B (2022-06-29)
GB [auth AG]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052584 3000068 SCOP2B (2022-06-29)
F [auth BC]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052828 3002143 SCOP2B (2022-06-29)
F [auth BC]SCOP2B SuperfamilyRibosomal protein L48052829 3001146 SCOP2B (2022-06-29)
JB [auth AZ]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8097826 3001397 SCOP2B (2022-06-29)
KB [auth Aa]SCOP2B SuperfamilyRibosomal S3Ae-like8053216 3002166 SCOP2B (2022-06-29)
NB [auth Ad]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052747 3000334 SCOP2B (2022-06-29)
NB [auth Ad]SCOP2B SuperfamilyAlpha-L RNA-binding motif8052745 3001473 SCOP2B (2022-06-29)
NB [auth Ad]SCOP2B SuperfamilyNucleic acid-binding proteins8052746 3000135 SCOP2B (2022-06-29)
OB [auth Ae]SCOP2B SuperfamilyRibosomal protein S78066001 3000799 SCOP2B (2022-06-29)
G [auth BD]SCOP2B SuperfamilyTranslational machinery components8052886 3000571 SCOP2B (2022-06-29)
RB [auth Ah]SCOP2B Superfamily50S Ribosomal protein L14-like8053075 3000433 SCOP2B (2022-06-29)
TB [auth Aj]SCOP2B SuperfamilyWinged helix DNA-binding domain8055720 3000034 SCOP2B (2022-06-29)
UB [auth Ak]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052708 3002138 SCOP2B (2022-06-29)
UB [auth Ak]SCOP2B SuperfamilyNucleic acid-binding proteins8052707 3000135 SCOP2B (2022-06-29)
VB [auth Al]SCOP2B SuperfamilyL30e-like8063980 3001739 SCOP2B (2022-06-29)
WB [auth Am]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052971 3001284 SCOP2B (2022-06-29)
WB [auth Am]SCOP2B SuperfamilyHomeodomain-like8052970 3000001 SCOP2B (2022-06-29)
XB [auth An]SCOP2B SuperfamilyTranslational machinery components8097832 3000571 SCOP2B (2022-06-29)
ZB [auth Ap]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082683 3000100 SCOP2B (2022-06-29)
BC [auth Ar]SCOP2B SuperfamilyS13-like H2TH domain8101439 3000053 SCOP2B (2022-06-29)
CC [auth As]SCOP2B SuperfamilyWinged helix DNA-binding domain8089322 3000034 SCOP2B (2022-06-29)
DC [auth At]SCOP2B SuperfamilyRibosomal protein S108097814 3001336 SCOP2B (2022-06-29)
EC [auth Au]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8101986 3000068 SCOP2B (2022-06-29)
FC [auth Av]SCOP2B SuperfamilyRibosomal protein S88079081 3000709 SCOP2B (2022-06-29)
IC [auth Ay]SCOP2B SuperfamilyWinged helix DNA-binding domain8090991 3000034 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth BG]PF01248e8p2kBG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
K [auth BH]PF00347e8p2kBH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
L [auth BI]PF00252e8p2kBI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
M [auth BJ]PF00281,PF00673e8p2kBJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
O [auth BL]PF01294e8p2kBL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
P [auth BM]PF00467,PF01929e8p2kBM1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
Q [auth BN]PF00827e8p2kBN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
R [auth BO]PF00572e8p2kBO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
S [auth BP]PF00237e8p2kBP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
T [auth BQ]PF17135e8p2kBQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
U [auth BR]PF01280e8p2kBR2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
U [auth BR]PF01280e8p2kBR1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
V [auth BS]F_UNCLASSIFIEDe8p2kBS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
V [auth BS]PF01775e8p2kBS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
W [auth BT]PF01157e8p2kBT1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
X [auth BU]PF01776e8p2kBU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
Y [auth BV]PF00238e8p2kBV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
Z [auth BW]PF01246e8p2kBW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
AA [auth BX]PF00276,PF03939e8p2kBX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
BA [auth BY]PF16906e8p2kBY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
CA [auth BZ]PF00467,PF01777e8p2kBZ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
DA [auth Ba]PF00828e8p2kBa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
EA [auth Bb]PF01779e8p2kBb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
FA [auth Bc]PF01248e8p2kBc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
GA [auth Bd]PF01198e8p2kBd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
HA [auth Be]PF01655e8p2kBe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
IA [auth Bf]PF01247e8p2kBf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
JA [auth Bg]PF01199e8p2kBg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
KA [auth Bh]PF00831e8p2kBh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
LA [auth Bi]PF01158e8p2kBi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
MA [auth Bj]PF01907e8p2kBj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
D [auth BA]PF00181e8p2kBA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
D [auth BA]PF03947e8p2kBA2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
NA [auth Bk]PF01781e8p2kBk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
OA [auth Bl]PF00832e8p2kBl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
PA [auth Bm]PF01020e8p2kBm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
QA [auth Bo]PF00935e8p2kBo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
RA [auth Bp]PF01780e8p2kBp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
SA [auth Br]PF01778e8p2kBr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
TA [auth Bs]PF00466e8p2kBs2 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
TA [auth Bs]PF17777e8p2kBs1 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: PF17777ECOD (1.6)
UA [auth Bt]PF00298e8p2kBt1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
UA [auth Bt]PF03946e8p2kBt2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
VA [auth Bv]PF00687e8p2kBv2 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: PF00687ECOD (1.6)
VA [auth Bv]PF00687e8p2kBv1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: PF00687ECOD (1.6)
WA [auth MA]PF00557e8p2kMA1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: Creatinase/aminopeptidase (From Topology)T: Creatinase/aminopeptidaseF: PF00557ECOD (1.6)
E [auth BB]PF00297e8p2kBB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
XA [auth Na]PF01849e8p2kNa1 A: beta sandwichesX: Nascent polypeptide-associated complex (NAC) dimerization domain (From Topology)H: Nascent polypeptide-associated complex (NAC) dimerization domain (From Topology)T: Nascent polypeptide-associated complex (NAC) dimerization domainF: PF01849ECOD (1.6)
AB [auth AA]PF01667e8p2kAA1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
BB [auth AB]PF01200e8p2kAB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
CB [auth AC]PF01599e8p2kAC1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
DB [auth AD]PF04758e8p2kAD1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
EB [auth AE]PF01283e8p2kAE1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
FB [auth AF]PF00400e8p2kAF1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
GB [auth AG]PF00253e8p2kAG1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
F [auth BC]PF00573e8p2kBC2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
F [auth BC]PF14374e8p2kBC1 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
JB [auth AZ]PF00318,PF16122e8p2kAZ1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318,PF16122ECOD (1.6)
KB [auth Aa]PF01015e8p2kAa1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
KB [auth Aa]PF01015e8p2kAa2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
LB [auth Ab]PF03719e8p2kAb1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
LB [auth Ab]PF00333e8p2kAb3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
LB [auth Ab]PF00333e8p2kAb2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
MB [auth Ac]PF00189e8p2kAc2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
MB [auth Ac]PF07650e8p2kAc1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
NB [auth Ad]PF00900e8p2kAd1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
NB [auth Ad]PF00467,PF16121e8p2kAd3 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
NB [auth Ad]PF00900,PF01479,PF08071e8p2kAd2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
OB [auth Ae]PF00177e8p2kAe1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
PB [auth Af]PF01092e8p2kAf1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
QB [auth Ag]PF01251e8p2kAg2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
G [auth BD]PF14204,PF17144e8p2kBD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
RB [auth Ah]PF01201e8p2kAh1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
SB [auth Ai]PF00163,PF01479e8p2kAi1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
TB [auth Aj]PF03501e8p2kAj1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
UB [auth Ak]PF00366,PF16205e8p2kAk1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
VB [auth Al]PF01248e8p2kAl1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
WB [auth Am]PF08069e8p2kAm1 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
WB [auth Am]PF00312e8p2kAm2 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
XB [auth An]PF00411e8p2kAn1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
YB [auth Ao]PF00203e8p2kAo1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
ZB [auth Ap]PF00380e8p2kAp1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
AC [auth Aq]PF00833e8p2kAq1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
H [auth BE]PF01159,PF03868e8p2kBE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159,PF03868ECOD (1.6)
BC [auth Ar]PF00416e8p2kAr1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
CC [auth As]PF01090e8p2kAs1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
DC [auth At]PF00338e8p2kAt1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
EC [auth Au]PF01249e8p2kAu1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
FC [auth Av]PF00410e8p2kAv1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
FC [auth Av]PF00410e8p2kAv2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
GC [auth Aw]PF00164e8p2kAw1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
HC [auth Ax]PF01282e8p2kAx1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
IC [auth Ay]PF03297e8p2kAy1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
JC [auth Az]PF05162e8p2kAz1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
I [auth BF]PF00327,PF08079e8p2kBF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth BG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
K [auth BH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
L [auth BI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
M [auth BJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
M [auth BJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
N [auth BK]PF00342Phosphoglucose isomerase (PGI)Phosphoglucose isomerasePhosphoglucose isomerase catalyses the interconversion of glucose-6-phosphate and fructose-6-phosphate.Domain
O [auth BL]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
P [auth BM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
Q [auth BN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
R [auth BO]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
S [auth BP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
T [auth BQ]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
U [auth BR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
V [auth BS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
W [auth BT]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
X [auth BU]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
Y [auth BV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
Z [auth BW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
AA [auth BX]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
AA [auth BX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
BA [auth BY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
BA [auth BY]PF00467KOW motif (KOW)KOW motif- Family
CA [auth BZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
CA [auth BZ]PF00467KOW motif (KOW)KOW motif- Family
DA [auth Ba]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
EA [auth Bb]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
FA [auth Bc]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
GA [auth Bd]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
HA [auth Be]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
IA [auth Bf]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
JA [auth Bg]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
KA [auth Bh]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
LA [auth Bi]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
MA [auth Bj]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
D [auth BA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
D [auth BA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
NA [auth Bk]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
OA [auth Bl]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
PA [auth Bm]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
QA [auth Bo]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
RA [auth Bp]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
SA [auth Br]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
TA [auth Bs]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
TA [auth Bs]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
UA [auth Bt]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
UA [auth Bt]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
VA [auth Bv]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
WA [auth MA]PF00557Metallopeptidase family M24 (Peptidase_M24)Metallopeptidase family M24This family contains metallopeptidases. It also contains non-peptidase homologues such as the N terminal domain of Spt16 which is a histone H3-H4 binding module [3].Domain
E [auth BB]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
XA [auth Na]PF01849NAC domain (NAC)NAC domain- Family
YA [auth Nb]PF01849NAC domain (NAC)NAC domain- Family
AB [auth AA]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
BB [auth AB]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
CB [auth AC]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
DB [auth AD]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
EB [auth AE]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
FB [auth AF]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
GB [auth AG]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
F [auth BC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
F [auth BC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
JB [auth AZ]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
JB [auth AZ]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
LB [auth Ab]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
LB [auth Ab]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
MB [auth Ac]PF07650KH domain (KH_2)KH domain- Domain
MB [auth Ac]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
NB [auth Ad]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
NB [auth Ad]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
NB [auth Ad]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
NB [auth Ad]PF00467KOW motif (KOW)KOW motif- Family
OB [auth Ae]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
PB [auth Af]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
QB [auth Ag]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
G [auth BD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
G [auth BD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
RB [auth Ah]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
SB [auth Ai]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
SB [auth Ai]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
TB [auth Aj]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
UB [auth Ak]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
UB [auth Ak]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
VB [auth Al]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
WB [auth Am]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
WB [auth Am]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
XB [auth An]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
YB [auth Ao]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
ZB [auth Ap]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
AC [auth Aq]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
H [auth BE]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domain- Domain
H [auth BE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
BC [auth Ar]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
CC [auth As]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
DC [auth At]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
EC [auth Au]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
FC [auth Av]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
GC [auth Aw]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
HC [auth Ax]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
IC [auth Ay]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
JC [auth Az]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
I [auth BF]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
I [auth BF]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B5]28S rRNA---
J [auth BG]60S ribosomal protein L7a
K [auth BH]60S ribosomal protein L9- - -
L [auth BI]60S ribosomal protein L10- - -
M [auth BJ]60S ribosomal protein L11- - -
N [auth BK]Glucose-6-phosphate isomerase
O [auth BL]60S ribosomal protein L13- - -
P [auth BM]60S ribosomal protein L14- - -
Q [auth BN]Ribosomal protein L15- - -
R [auth BO]60S ribosomal protein L13a
S [auth BP]uL22- - -
B [auth B7]5S rRNA---
T [auth BQ]eL18
U [auth BR]Ribosomal protein L19- - -
V [auth BS]60S ribosomal protein L18a
W [auth BT]60S ribosomal protein L21- - -
X [auth BU]60S ribosomal protein L22- - -
Y [auth BV]Ribosomal protein L23- - -
Z [auth BW]Ribosomal protein L24- - -
AA [auth BX]Ribosomal_L23eN domain-containing protein- - -
BA [auth BY]Ribosomal protein L26- - -
CA [auth BZ]60S ribosomal protein L27- - -
C [auth B8]5.8S rRNA---
DA [auth Ba]60S ribosomal protein L27a- - -
EA [auth Bb]60S ribosomal protein L29- - -
FA [auth Bc]60S ribosomal protein L30- - -
GA [auth Bd]60S ribosomal protein L31- - -
HA [auth Be]Ribosomal protein L32- - -
IA [auth Bf]60S ribosomal protein L35a- - -
JA [auth Bg]60S ribosomal protein L34- - -
KA [auth Bh]60S ribosomal protein L35- - -
LA [auth Bi]60S ribosomal protein L36- - -
MA [auth Bj]Ribosomal protein L37- - -
D [auth BA]60S ribosomal protein L8
NA [auth Bk]60S ribosomal protein L38- - -
OA [auth Bl]60S ribosomal protein L39-like
PA [auth Bm]Ubiquitin-60S ribosomal protein L40
QA [auth Bo]eL42- - -
RA [auth Bp]60S ribosomal protein L37a- - -
SA [auth Br]60S ribosomal protein L28- - -
TA [auth Bs]60S acidic ribosomal protein P0- - -
UA [auth Bt]60S ribosomal protein L12- - -
VA [auth Bv]Ribosomal protein uL1- - -
WA [auth MA]Methionine aminopeptidase 1
E [auth BB]Ribosomal protein L3- - -
XA [auth Na]Nascent polypeptide-associated complex subunit alpha
YA [auth Nb]Transcription factor BTF3- - -
ZA [auth A2]18s rRNA---
AB [auth AA]40S ribosomal protein S27- - -
BB [auth AB]40S ribosomal protein S28- - -
CB [auth AC]Ribosomal protein S27a- - -
DB [auth AD]40S ribosomal protein S30- - -
EB [auth AE]eS26
FB [auth AF]RACK1- - -
GB [auth AG]40S ribosomal protein S29- - -
F [auth BC]60S ribosomal protein L4- - -
HB [auth AI]E-site tRNA---
IB [auth AT]P-site Val-tRNA---
JB [auth AZ]40S ribosomal protein SA- - -
KB [auth Aa]40S ribosomal protein S3a- - -
LB [auth Ab]40S ribosomal protein S2
MB [auth Ac]40S ribosomal protein S3- - -
NB [auth Ad]40S ribosomal protein S4- - -
OB [auth Ae]Ribosomal protein S5- - -
PB [auth Af]40S ribosomal protein S6- - -
QB [auth Ag]40S ribosomal protein S7- - -
G [auth BD]Ribosomal protein L5 eukaryotic C-terminal domain-containing protein
RB [auth Ah]40S ribosomal protein S8- - -
SB [auth Ai]40S ribosomal protein S9- - -
TB [auth Aj]S10_plectin domain-containing protein- - -
UB [auth Ak]40S ribosomal protein S11- - -
VB [auth Al]40S ribosomal protein S12- - -
WB [auth Am]40S ribosomal protein S13- - -
XB [auth An]40S ribosomal protein S14- - -
YB [auth Ao]40S ribosomal protein uS19- - -
ZB [auth Ap]uS9- - -
AC [auth Aq]40S ribosomal protein eS17- - -
H [auth BE]60S ribosomal protein L6- - -
BC [auth Ar]40S ribosomal protein S18- - -
CC [auth As]40S ribosomal protein S19- - -
DC [auth At]40S ribosomal protein uS10- - -
EC [auth Au]40S ribosomal protein S21
FC [auth Av]Ribosomal protein S15a- - -
GC [auth Aw]40S ribosomal protein S23- - -
HC [auth Ax]40S ribosomal protein S24
IC [auth Ay]40S ribosomal protein S25- - -
JC [auth Az]60S ribosomal protein L41- - -
I [auth BF]Ribosomal Protein uL30

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth BG]IPR001921Large ribosomal subunit protein eL8Family
J [auth BG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth BG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth BG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth BG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
N [auth BK]IPR035476Phosphoglucose isomerase, SIS domain 1Domain
N [auth BK]IPR018189Phosphoglucose isomerase, conserved siteConserved Site
N [auth BK]IPR046348SIS domain superfamilyHomologous Superfamily
N [auth BK]IPR035482Phosphoglucose isomerase, SIS domain 2Domain
N [auth BK]IPR001672Phosphoglucose isomerase (PGI)Family
N [auth BK]IPR023096Phosphoglucose isomerase, C-terminalHomologous Superfamily
R [auth BO]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
R [auth BO]IPR005822Large ribosomal subunit protein uL13Family
R [auth BO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
R [auth BO]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
T [auth BQ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
T [auth BQ]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
T [auth BQ]IPR000039Large ribosomal subunit protein eL18Family
T [auth BQ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
V [auth BS]IPR028877Large ribosomal subunit protein eL20Family
V [auth BS]IPR023573Large ribosomal subunit protein eL20 domainDomain
V [auth BS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
D [auth BA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth BA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth BA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth BA]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
D [auth BA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth BA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth BA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth BA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth BA]IPR002171Large ribosomal subunit protein uL2Family
OA [auth Bl]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
OA [auth Bl]IPR000077Large ribosomal subunit protein eL39Family
OA [auth Bl]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
PA [auth Bm]IPR019956Ubiquitin domainDomain
PA [auth Bm]IPR019954Ubiquitin conserved siteConserved Site
PA [auth Bm]IPR001975Large ribosomal subunit protein eL40 domainDomain
PA [auth Bm]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
PA [auth Bm]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
PA [auth Bm]IPR000626Ubiquitin-like domainDomain
WA [auth MA]IPR031615MYND-like zinc fingerDomain
WA [auth MA]IPR001714Peptidase M24, methionine aminopeptidaseFamily
WA [auth MA]IPR002467Peptidase M24A, methionine aminopeptidase, subfamily 1Family
WA [auth MA]IPR036005Creatinase/aminopeptidase-likeHomologous Superfamily
WA [auth MA]IPR000994Peptidase M24Domain
XA [auth Na]IPR038187NAC A/B domain superfamilyHomologous Superfamily
XA [auth Na]IPR044034Nascent polypeptide-associated complex subunit alpha-like, UBA domainDomain
XA [auth Na]IPR016641Nascent polypeptide-associated complex subunit alpha-likeFamily
XA [auth Na]IPR002715Nascent polypeptide-associated complex NAC domainDomain
YA [auth Nb]IPR039370Transcription factor BTF3Family
YA [auth Nb]IPR038187NAC A/B domain superfamilyHomologous Superfamily
YA [auth Nb]IPR002715Nascent polypeptide-associated complex NAC domainDomain
EB [auth AE]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
EB [auth AE]IPR000892Small ribosomal subunit protein eS26Family
EB [auth AE]IPR047864Ribosomal protein eS26, conserved siteConserved Site
LB [auth Ab]IPR000851Small ribosomal subunit protein uS5Family
LB [auth Ab]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
LB [auth Ab]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
LB [auth Ab]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
LB [auth Ab]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
LB [auth Ab]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
LB [auth Ab]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
G [auth BD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
G [auth BD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
TB [auth Aj]IPR037447Small ribosomal subunit protein eS10Family
TB [auth Aj]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
TB [auth Aj]IPR005326Plectin/eS10, N-terminalDomain
EC [auth Au]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
EC [auth Au]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
EC [auth Au]IPR001931Small ribosomal subunit protein eS21Family
HC [auth Ax]IPR001976Small ribosomal subunit protein eS24Family
HC [auth Ax]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
HC [auth Ax]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
I [auth BF]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
I [auth BF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
I [auth BF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
I [auth BF]IPR039699Large ribosomal subunit protein uL30Family
I [auth BF]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
I [auth BF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth B5]1MA Parent Component: A

A [auth B5]5MC Parent Component: C

A [auth B5]6MZ Parent Component: A

A [auth B5]A2M Parent Component: A

A [auth B5]OMC Parent Component: C

A [auth B5]OMG Parent Component: G

A [auth B5]OMU Parent Component: U

A [auth B5]PSU Parent Component: U

A [auth B5]UR3 Parent Component: U

A [auth B5]UY1
C [auth B8]OMG Parent Component: G

C [auth B8]PSU Parent Component: U

DA [auth Ba]V5N Parent Component: HIS

EA [auth Bb]MLZ Parent Component: LYS

RESIDAA0076

PSI-MOD :  N6-methyl-L-lysine MOD:00085
D [auth BA]V5N Parent Component: HIS

RESIDAA0076

PA [auth Bm]M3L Parent Component: LYS

RESIDAA0076 , AA0074

PSI-MOD :  N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083
QA [auth Bo]MLZ Parent Component: LYS

RESIDAA0076 , AA0074 , AA0076

PSI-MOD :  N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6-methyl-L-lysine MOD:00085
SA [auth Br]SAC Parent Component: SER

RESIDAA0076 , AA0074 , AA0076

E [auth BB]HIC Parent Component: HIS

RESIDAA0076 , AA0074 , AA0076 , AA0317

PSI-MOD :  N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6-methyl-L-lysine MOD:00085 , 1'-methyl-L-histidine MOD:00322
ZA [auth A2]4AC RESIDAA0076 , AA0074 , AA0076 , AA0317

ZA [auth A2]6MZ Parent Component: A

RESIDAA0076 , AA0074 , AA0076 , AA0317

ZA [auth A2]A2M Parent Component: A

RESIDAA0076 , AA0074 , AA0076 , AA0317

ZA [auth A2]B8N RESIDAA0076 , AA0074 , AA0076 , AA0317

ZA [auth A2]G7M Parent Component: G

RESIDAA0076 , AA0074 , AA0076 , AA0317

ZA [auth A2]MA6 Parent Component: A

RESIDAA0076 , AA0074 , AA0076 , AA0317

ZA [auth A2]OMC Parent Component: C

RESIDAA0076 , AA0074 , AA0076 , AA0317

ZA [auth A2]OMG Parent Component: G

RESIDAA0076 , AA0074 , AA0076 , AA0317

ZA [auth A2]OMU Parent Component: U

RESIDAA0076 , AA0074 , AA0076 , AA0317

ZA [auth A2]PSU Parent Component: U

RESIDAA0076 , AA0074 , AA0076 , AA0317

F [auth BC]AYA Parent Component: ALA

RESIDAA0076 , AA0074 , AA0076 , AA0317

IB [auth AT]5MU Parent Component: U

RESIDAA0076 , AA0074 , AA0076 , AA0317

IB [auth AT]PSU Parent Component: U

RESIDAA0076 , AA0074 , AA0076 , AA0317

JB [auth AZ]SAC Parent Component: SER

RESIDAA0076 , AA0074 , AA0076 , AA0317

G [auth BD]UNK RESIDAA0076 , AA0074 , AA0076 , AA0317

XB [auth An]5F0 RESIDAA0076 , AA0074 , AA0076 , AA0317

BC [auth Ar]SAC Parent Component: SER

RESIDAA0076 , AA0074 , AA0076 , AA0317

CC [auth As]NMM Parent Component: ARG

RESIDAA0076 , AA0074 , AA0076 , AA0317

EC [auth Au]AME Parent Component: MET

RESIDAA0076 , AA0074 , AA0076 , AA0317

GC [auth Aw]HY3 Parent Component: PRO

RESIDAA0076 , AA0074 , AA0076 , AA0317 , AA0029

PSI-MOD :  N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6-methyl-L-lysine MOD:00085 , 1'-methyl-L-histidine MOD:00322 , 3-hydroxy-L-proline MOD:00038