8DGF
Avs4 bound to phage PhiV-1 portal
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
F | PF12236 | e8dgfF2 | A: beta barrels | X: Barrel domain in upper collar protein (From Topology) | H: Barrel domain in upper collar protein (From Topology) | T: Barrel domain in upper collar protein | F: PF12236 | ECOD (1.6) |
F | PF12236 | e8dgfF1 | A: alpha bundles | X: Alpha-helical domain in upper collar protein (From Topology) | H: Alpha-helical domain in upper collar protein (From Topology) | T: Alpha-helical domain in upper collar protein | F: PF12236 | ECOD (1.6) |
E | PF12236 | e8dgfE1 | A: beta barrels | X: Barrel domain in upper collar protein (From Topology) | H: Barrel domain in upper collar protein (From Topology) | T: Barrel domain in upper collar protein | F: PF12236 | ECOD (1.6) |
E | PF12236 | e8dgfE2 | A: alpha bundles | X: Alpha-helical domain in upper collar protein (From Topology) | H: Alpha-helical domain in upper collar protein (From Topology) | T: Alpha-helical domain in upper collar protein | F: PF12236 | ECOD (1.6) |
G | PF12236 | e8dgfG1 | A: beta barrels | X: Barrel domain in upper collar protein (From Topology) | H: Barrel domain in upper collar protein (From Topology) | T: Barrel domain in upper collar protein | F: PF12236 | ECOD (1.6) |
G | PF12236 | e8dgfG2 | A: alpha bundles | X: Alpha-helical domain in upper collar protein (From Topology) | H: Alpha-helical domain in upper collar protein (From Topology) | T: Alpha-helical domain in upper collar protein | F: PF12236 | ECOD (1.6) |
H | PF12236 | e8dgfH2 | A: beta barrels | X: Barrel domain in upper collar protein (From Topology) | H: Barrel domain in upper collar protein (From Topology) | T: Barrel domain in upper collar protein | F: PF12236 | ECOD (1.6) |
H | PF12236 | e8dgfH1 | A: alpha bundles | X: Alpha-helical domain in upper collar protein (From Topology) | H: Alpha-helical domain in upper collar protein (From Topology) | T: Alpha-helical domain in upper collar protein | F: PF12236 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
FME | Parent Component: MET :  AA0021 , AA0566 :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |