8B38

Chaetoceros socialis forma radians RNA virus 1 full capsid atomic model

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPF00073e8b38B1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00073ECOD (1.6)
CF_UNCLASSIFIEDe8b38C1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08762CRPV capsid protein like (CRPV_capsid)CRPV capsid protein likeThis is a family of capsid proteins found in positive stranded ssRNA viruses such as cricket paralysis virus (CRPV). It forms an all beta sheet structure [1].Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR014872Dicistrovirus, capsid-polyprotein, C-terminalDomain
IPR029053Viral coat protein subunitHomologous Superfamily
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR024343Capsid protein VP4, dicistrovirusDomain
IPR014872Dicistrovirus, capsid-polyprotein, C-terminalDomain
IPR029053Viral coat protein subunitHomologous Superfamily
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR024343Capsid protein VP4, dicistrovirusDomain
IPR014872Dicistrovirus, capsid-polyprotein, C-terminalDomain
IPR029053Viral coat protein subunitHomologous Superfamily
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR024343Capsid protein VP4, dicistrovirusDomain