7VCQ
structure of viral protein BKRF4 in complex with H3.3-H4-ASF1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | ASF1-like | 8067067 | 3002057 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | ASF1-like | 8067067 | 3002057 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | ASF1-like | 8067067 | 3002057 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00125 | e7vcqA1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
D [auth C] | PF00125 | e7vcqC1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
G | PF00125 | e7vcqG1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
B | PF15511 | e7vcqB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
E | PF15511 | e7vcqE1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
H | PF15511 | e7vcqH1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
C [auth D] | PF04729 | e7vcqD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF04729 | ECOD (1.6) |
F | PF04729 | e7vcqF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF04729 | ECOD (1.6) |
I | PF04729 | e7vcqI1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF04729 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth C], G | PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain |
PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain | |
C [auth D], F, I | PF04729 | ASF1 like histone chaperone (ASF1_hist_chap) | ASF1 like histone chaperone | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D [auth C], G | IPR009072 | Histone-fold | Homologous Superfamily |
A, D [auth C], G | IPR007125 | Histone H2A/H2B/H3 | Domain |
A, D [auth C], G | IPR000164 | Histone H3/CENP-A | Family |
IPR009072 | Histone-fold | Homologous Superfamily | |
IPR035425 | CENP-T/Histone H4, histone fold | Domain | |
IPR001951 | Histone H4 | Family | |
IPR019809 | Histone H4, conserved site | Conserved Site | |
IPR004823 | TATA box binding protein associated factor (TAF), histone-like fold domain | Domain | |
C [auth D], F, I | IPR036747 | Histone chaperone ASF1-like superfamily | Homologous Superfamily |
C [auth D], F, I | IPR006818 | Histone chaperone ASF1-like | Family |