Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF08443e7lgnA1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: ATP-graspF: PF08443ECOD (1.6)
APF08245e7lgnA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF08245ECOD (1.6)
AF_UNCLASSIFIEDe7lgnA3 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Succinyl-CoA synthetase domains (From Topology)T: Succinyl-CoA synthetase domainsF: F_UNCLASSIFIEDECOD (1.6)
BPF08443e7lgnB1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: ATP-graspF: PF08443ECOD (1.6)
BPF08245e7lgnB2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF08245ECOD (1.6)
BF_UNCLASSIFIEDe7lgnB4 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Succinyl-CoA synthetase domains (From Topology)T: Succinyl-CoA synthetase domainsF: F_UNCLASSIFIEDECOD (1.6)
BPF02875e7lgnB3 A: a/b three-layered sandwichesX: MurD-like peptide ligases, peptide-binding domain (From Topology)H: MurD-like peptide ligases, peptide-binding domain (From Topology)T: MurD-like peptide ligases, peptide-binding domainF: PF02875ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF08245Mur ligase middle domain (Mur_ligase_M)Mur ligase middle domain- Domain
A, B
PF08443RimK-like ATP-grasp domain (RimK)RimK-like ATP-grasp domainThis ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK [1].Domain
A, B
PF02875Mur ligase, glutamate ligase domain (Mur_ligase_C)Mur ligase, glutamate ligase domainThis entry contains a number of related ligase enzymes which have EC numbers 6.3.2.* which includes: MurC (Swiss:P17952), MurD (Swiss:P14900), MurE (Swiss:P22188), MurF (Swiss:P11880), Mpl (Swiss:P37773) and FolC (Swiss:P08192). MurC, MurD, MurE and ...This entry contains a number of related ligase enzymes which have EC numbers 6.3.2.* which includes: MurC (Swiss:P17952), MurD (Swiss:P14900), MurE (Swiss:P22188), MurF (Swiss:P11880), Mpl (Swiss:P37773) and FolC (Swiss:P08192). MurC, MurD, MurE and MurF catalyse consecutive steps in the synthesis of peptidoglycan. Peptidoglycan consists of a sheet of two sugar derivatives, with one of these N-acetylmuramic acid attaching to a small pentapeptide. The pentapeptide is is made of L-alanine, D-glutamic acid, Meso-diaminopimelic acid and D-alanyl alanine. The peptide moiety is synthesised by successively adding these amino acids to UDP-N-acetylmuramic acid. MurC transfers the L-alanine, MurD transfers the D-glutamate, MurE transfers the diaminopimelic acid, and MurF transfers the D-alanyl alanine [1,3,4]. This entry also includes folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) [2].
Domain