7EF3
crystal structure of maize SHH2 SAWADEE domain in complex with H3K9me2 peptide
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF16719 | e7ef3A1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF16719 | ECOD (1.6) |
A | PF16719 | e7ef3A2 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF16719 | ECOD (1.6) |
B | PF16719 | e7ef3B1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF16719 | ECOD (1.6) |
B | PF16719 | e7ef3B2 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF16719 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16719 | SAWADEE domain (SAWADEE) | SAWADEE domain | The SAWADEE domain, found in plant homeobox proteins, has a pair of tandem tudor-like folds that bind chromatin [1]. | Domain | |
C [auth P], D [auth Q] | PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR032001 | SAWADEE domain | Domain | |
IPR001356 | Homeodomain | Domain | |
IPR039276 | Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2 | Family | |
C [auth P], D [auth Q] | IPR009072 | Histone-fold | Homologous Superfamily |
C [auth P], D [auth Q] | IPR007125 | Histone H2A/H2B/H3 | Domain |
C [auth P], D [auth Q] | IPR000164 | Histone H3/CENP-A | Family |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
C [auth P], D [auth Q] | MLY | Parent Component: LYS :  AA0075 :  N6,N6-dimethyl-L-lysine MOD:00084 |