| IPR026983 | Dynein heavy chain | Family |
| IPR013602 | Dynein heavy chain, linker | Domain |
| IPR035706 | Dynein heavy chain, ATP-binding dynein motor region | Domain |
| IPR041228 | Dynein heavy chain, C-terminal domain | Domain |
| IPR003593 | AAA+ ATPase domain | Domain |
| IPR041658 | Dynein heavy chain AAA lid domain | Domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
| IPR042228 | Dynein heavy chain, linker, subdomain 3 | Homologous Superfamily |
| IPR035699 | Dynein heavy chain, hydrolytic ATP-binding dynein motor region | Domain |
| IPR042219 | Dynein heavy chain AAA lid domain superfamily | Homologous Superfamily |
| IPR024743 | Dynein heavy chain, coiled coil stalk | Domain |
| IPR013594 | Dynein heavy chain, tail | Domain |
| IPR043157 | Dynein heavy chain, AAA1 domain, small subdomain | Homologous Superfamily |
| IPR042222 | Dynein heavy chain, domain 2, N-terminal | Homologous Superfamily |
| IPR049400 | Cytoplasmic dynein 2 heavy chain 1, AAA+ ATPase domain | Domain |
| IPR043160 | Dynein heavy chain, C-terminal domain, barrel region | Homologous Superfamily |
| IPR004273 | Dynein heavy chain region D6 P-loop domain | Domain |
| IPR024317 | Dynein heavy chain, AAA module D4 | Domain |
| IPR008332 | Methylguanine DNA methyltransferase, ribonuclease-like domain | Domain |
| IPR036217 | Methylated DNA-protein cysteine methyltransferase, DNA binding domain | Homologous Superfamily |
| IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
| IPR036631 | Methylated DNA-protein cysteine methyltransferase domain superfamily | Homologous Superfamily |
| IPR014048 | Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding | Domain |
| IPR001497 | Methylated-DNA-[protein]-cysteine S-methyltransferase, active site | Active Site |
| IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily |
| IPR001680 | WD40 repeat | Repeat |
| IPR042505 | Cytoplasmic dynein 2 intermediate chain 1 | Family |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
| IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily |
| IPR001680 | WD40 repeat | Repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
| IPR022780 | Dynein family light intermediate chain | Family |
| IPR040045 | Cytoplasmic dynein 2 light intermediate chain 1 | Family |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
| IPR016561 | Dynein light chain roadblock-type 1/2 | Family |
| IPR004942 | Roadblock/LAMTOR2 domain | Domain |
| IPR037177 | Dynein light chain superfamily | Homologous Superfamily |
| IPR019763 | Dynein light chain, type 1/2, conserved site | Conserved Site |
| IPR001372 | Dynein light chain, type 1/2 | Family |