6ZNL
Cryo-EM structure of the dynactin complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
K | SCOP2B Superfamily | Subunits of heterodimeric actin filament capping protein Capz | 8077311 | 3001499 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00022 | e6znlA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
B | PF00022 | e6znlB2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
C | PF00022 | e6znlC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
D | PF00022 | e6znlD1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
E | PF00022 | e6znlE2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
F | PF00022 | e6znlF2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
G | PF00022 | e6znlG2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
I | PF00022 | e6znlI2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
H | PF00022 | e6znlH1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
J | PF00022 | e6znlJ1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
K | PF01267 | e6znlK2 | A: alpha bundles | X: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz (From Topology) | H: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz (From Topology) | T: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | F: PF01267 | ECOD (1.6) |
K | PF01267 | e6znlK1 | A: a+b two layers | X: a+b domain in Capz (From Topology) | H: a+b domain in Capz (From Topology) | T: a+b domain in Capz | F: PF01267 | ECOD (1.6) |
K | PF01267 | e6znlK3 | A: few secondary structure elements | X: beta-barrel domain in Capz (From Topology) | H: beta-barrel domain in Capz (From Topology) | T: beta-barrel domain in Capz | F: PF01267 | ECOD (1.6) |
L | PF01115 | e6znlL2 | A: alpha bundles | X: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz (From Topology) | H: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz (From Topology) | T: alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | F: PF01115 | ECOD (1.6) |
L | PF01115 | e6znlL1 | A: a+b two layers | X: a+b domain in Capz (From Topology) | H: a+b domain in Capz (From Topology) | T: a+b domain in Capz | F: PF01115 | ECOD (1.6) |
L | PF01115 | e6znlL3 | A: few secondary structure elements | X: beta-barrel domain in Capz (From Topology) | H: beta-barrel domain in Capz (From Topology) | T: beta-barrel domain in Capz | F: PF01115 | ECOD (1.6) |
P [auth U] | F_UNCLASSIFIED | e6znlU1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: F_UNCLASSIFIED | ECOD (1.6) |
Q [auth V] | PF21711 | e6znlV1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF21711 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00022 | Actin (Actin) | Actin | - | Family | |
R [auth Y] | PF05502 | Dynactin p62 family (Dynactin_p62) | Dynactin p62 family | - | Family |
PF00022 | Actin (Actin) | Actin | - | Family | |
PF00022 | Actin (Actin) | Actin | - | Family | |
PF01267 | F-actin capping protein alpha subunit (F-actin_cap_A) | F-actin capping protein alpha subunit | - | Family | |
PF01115 | F-actin capping protein, beta subunit (F_actin_cap_B) | F-actin capping protein, beta subunit | - | Family | |
M, N, T [auth m], U [auth n] | PF04912 | Dynamitin (Dynamitin) | Dynamitin | - | Family |
O, V [auth o] | PF07426 | Dynactin subunit p22 (Dynactin_p22) | Dynactin subunit p22 | - | Family |
Q [auth V] | PF21711 | Dynactin subunit 5 (DCTN5) | Dynactin subunit 5 | - | Repeat |