6XMD

SM Protein Vps45 in Complex with Qa SNARE Tlg2 (1-310)

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00995e6xmdA3 A: alpha complex topologyX: alpha-helical domain in sec1/munc18-like (SM) proteins (From Topology)H: alpha-helical domain in sec1/munc18-like (SM) proteins (From Topology)T: alpha-helical domain in sec1/munc18-like (SM) proteinsF: PF00995ECOD (1.6)
APF00995e6xmdA2 A: a/b three-layered sandwichesX: Rossmann-like domains in Sec1/munc18-like proteins (From Topology)H: Rossmann-like domains in Sec1/munc18-like proteins (From Topology)T: Rossmann-like domains in Sec1/munc18-like proteinsF: PF00995ECOD (1.6)
BF_UNCLASSIFIEDe6xmdB1 A: alpha bundlesX: STAT-likeH: t-snare proteins (From Topology)T: t-snare proteinsF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00995Sec1 family (Sec1)Sec1 family- Family
PF05739SNARE domain (SNARE)SNARE domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Vps45-
Tlg2 Qa SNARE

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR027482Sec1-like, domain 2Homologous Superfamily
IPR043127Sec1-like, domain 3aHomologous Superfamily
IPR001619Sec1-like proteinFamily
IPR043154Sec1-like, domain 1Homologous Superfamily
IPR036045Sec1-like superfamilyHomologous Superfamily
IPR006012Syntaxin/epimorphin, conserved siteConserved Site
IPR000727Target SNARE coiled-coil homology domainDomain
IPR010989SNAREHomologous Superfamily
IPR045242SyntaxinFamily

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
A, B
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALSNARE Protein FamilySec1/Munc18-family (SM) Protein Vps45 in complex with Qa SNARE Tlg2