6WK3

Engineered carbene transferase RmaNOD Q52V, putative nitric oxide dioxygenase from Rhodothermus marinus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6wk3a_	All alpha proteins	Globin-like	Globin-like	automated matches	automated matches	(Rhodothermus marinus DSM 4252 ) [TaxId: 518766 ],	SCOPe (2.08)
B	d6wk3b_	All alpha proteins	Globin-like	Globin-like	automated matches	automated matches	(Rhodothermus marinus DSM 4252 ) [TaxId: 518766 ],	SCOPe (2.08)
C	d6wk3c_	All alpha proteins	Globin-like	Globin-like	automated matches	automated matches	(Rhodothermus marinus DSM 4252 ) [TaxId: 518766 ],	SCOPe (2.08)
D	d6wk3d1	All alpha proteins	Globin-like	Globin-like	automated matches	automated matches	(Rhodothermus marinus DSM 4252 ) [TaxId: 518766 ],	SCOPe (2.08)
D	d6wk3d2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Rhodothermus marinus DSM 4252 ) [TaxId: 518766 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Globin-like	8097542	3000554	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Globin-like	8097542	3000554	SCOP2B (2022-06-29)
C	SCOP2 Family	Globins	8097541	4000551	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	Globin-like	8097542	3000554	SCOP2 (2022-06-29)
D	SCOP2B Superfamily	Globin-like	8097542	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00042	e6wk3A1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: PF00042	ECOD (1.6)
B	PF00042	e6wk3B1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: PF00042	ECOD (1.6)
C	PF00042	e6wk3C1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: PF00042	ECOD (1.6)
D	PF00042	e6wk3D1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: PF00042	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (utative)
B	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (utative)
C	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (utative)
D	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00042	Globin (Globin)	Globin	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Nitric oxide dioxygenase	oxygen binding binding small molecule binding oxidoreductase activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen nitric oxide dioxygenase NAD(P)H activity catalytic activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor dioxygenase activity oxygen carrier activity molecular carrier activity organic cyclic compound binding tetrapyrrole binding heme binding oxygen binding binding small molecule binding oxidoreductase activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen nitric oxide dioxygenase NAD(P)H activity catalytic activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor dioxygenase activity oxygen carrier activity molecular carrier activity organic cyclic compound binding tetrapyrrole binding heme binding cation binding ion binding metal ion binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR009050	Globin-like superfamily	Homologous Superfamily
A, B, C, D	IPR000971	Globin	Domain
A, B, C, D	IPR012292	Globin/Protoglobin	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.