6VY1

Cryo-EM structure of filamentous PFD from Methanocaldococcus jannaschii

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	PF02996	e6vy1D1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
K [auth d]	PF02996	e6vy1d1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
A	PF02996	e6vy1A1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
B	PF02996	e6vy1B1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
C	PF02996	e6vy1C1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
E	PF02996	e6vy1E1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
F	PF02996	e6vy1F1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
G	PF02996	e6vy1G1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
H [auth a]	PF02996	e6vy1a1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
I [auth b]	PF02996	e6vy1b1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
J [auth c]	PF02996	e6vy1c1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
L [auth e]	PF02996	e6vy1e1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
M [auth f]	PF02996	e6vy1f1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)
N [auth g]	PF02996	e6vy1g1	A: alpha bundles	X: Long alpha-hairpin	H: Prefoldin (From Topology)	T: Prefoldin	F: PF02996	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E, A, B, C, D, E, F, G, H [auth a], I [auth b], J [auth c], K [auth d], L [auth e], M [auth f], N [auth g]	PF02996	Prefoldin subunit (Prefoldin)	Prefoldin subunit	-	Coiled-coil

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E, A, B, C, D, E, F, G, H [auth a], I [auth b], J [auth c], K [auth d], L [auth e], M [auth f], N [auth g]	Prefoldin subunit alpha 2	unfolded protein binding protein binding binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein maturation organic substance metabolic process protein folding biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein maturation organic substance metabolic process protein folding biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity protein-containing complex prefoldin complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E, A, B, C, D, E, F, G, H [auth a], I [auth b], J [auth c], K [auth d], L [auth e], M [auth f], N [auth g]	IPR004127	Prefoldin alpha-like	Family
A, B, C, D, E, A, B, C, D, E, F, G, H [auth a], I [auth b], J [auth c], K [auth d], L [auth e], M [auth f], N [auth g]	IPR011599	Prefoldin alpha subunit, archaea-type	Family
A, B, C, D, E, A, B, C, D, E, F, G, H [auth a], I [auth b], J [auth c], K [auth d], L [auth e], M [auth f], N [auth g]	IPR009053	Prefoldin	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.