6U52
Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB) Complexed with Sudan ebolavirus Nucleoprotein C-terminal Domain 634-738
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d6u52c_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Lama glama ) [TaxId: 9844 ], | SCOPe (2.08) |
A | d6u52a_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Lama glama ) [TaxId: 9844 ], | SCOPe (2.08) |
B | d6u52b_ | Alpha and beta proteins (a+b) | Ebola nucleoprotein C-terminal domain-like | Ebola nucleoprotein C-terminal domain-like | Ebola nucleoprotein C-terminal domain-like | Ebola nucleoprotein | SEBOV (Sudan virus - Boniface, Sudan,1976 ) [TaxId: 128948 ], | SCOPe (2.08) |
D | d6u52d_ | Alpha and beta proteins (a+b) | Ebola nucleoprotein C-terminal domain-like | Ebola nucleoprotein C-terminal domain-like | Ebola nucleoprotein C-terminal domain-like | Ebola nucleoprotein | SEBOV (Sudan virus - Boniface, Sudan,1976 ) [TaxId: 128948 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF07686 | e6u52C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
A | PF07686 | e6u52A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
B | PF05505 | e6u52B1 | A: a+b complex topology | X: C-terminal domain of Ebola nucleoprotein (From Homology) | H: C-terminal domain of Ebola nucleoprotein | T: C-terminal domain of Ebola nucleoprotein | F: PF05505 | ECOD (1.6) |
D | PF05505 | e6u52D1 | A: a+b complex topology | X: C-terminal domain of Ebola nucleoprotein (From Homology) | H: C-terminal domain of Ebola nucleoprotein | T: C-terminal domain of Ebola nucleoprotein | F: PF05505 | ECOD (1.6) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
VHH Sudan B (SB), anti-Sudan ebolavirus | VH | Lama glama (llama) | IGHV3S4*01, IGHJ4*01 | V-DOMAIN VH | IG | VH | IMGT (202417-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05505 | Ebola nucleoprotein (Ebola_NP) | Ebola nucleoprotein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB) | - | - | - | |
Nucleoprotein |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008609 | Ebola nucleoprotein | Family |