6TDY

Cryo-EM structure of Euglena gracilis mitochondrial ATP synthase, OSCP/F1/c-ring in rotational state 1


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe6tdyA3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: F_UNCLASSIFIEDECOD (1.6)
APF00306e6tdyA2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF00306ECOD (1.6)
APF00006e6tdyA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
BF_UNCLASSIFIEDe6tdyB3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: F_UNCLASSIFIEDECOD (1.6)
BPF00306e6tdyB1 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF00306ECOD (1.6)
BPF00006e6tdyB2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
CF_UNCLASSIFIEDe6tdyC2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: F_UNCLASSIFIEDECOD (1.6)
CPF00306e6tdyC3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF00306ECOD (1.6)
CPF00006e6tdyC1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
DPF02874e6tdyD3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
DPF22919e6tdyD1 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
DPF00006e6tdyD2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
EPF02874e6tdyE2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
EPF22919e6tdyE1 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
EPF00006e6tdyE3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
FPF02874e6tdyF2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
FPF22919e6tdyF3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
FPF00006e6tdyF1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
GPF00231e6tdyG1 A: a/b three-layered sandwichesX: ATP synthase (F1-ATPase), gamma subunit (From Topology)H: ATP synthase (F1-ATPase), gamma subunit (From Topology)T: ATP synthase (F1-ATPase), gamma subunitF: PF00231ECOD (1.6)
IF_UNCLASSIFIEDe6tdyI1 A: extended segmentsX: Epsilon subunit of mitochondrial F1F0-ATP synthase (From Topology)H: Epsilon subunit of mitochondrial F1F0-ATP synthase (From Topology)T: Epsilon subunit of mitochondrial F1F0-ATP synthaseF: F_UNCLASSIFIEDECOD (1.6)
JF_UNCLASSIFIEDe6tdyJ1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: F_UNCLASSIFIEDECOD (1.6)
KF_UNCLASSIFIEDe6tdyK1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: F_UNCLASSIFIEDECOD (1.6)
LF_UNCLASSIFIEDe6tdyL1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: F_UNCLASSIFIEDECOD (1.6)
OPF00137e6tdyO1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
PPF00137e6tdyP1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
QPF00137e6tdyQ1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
RPF00137e6tdyR1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
SPF00137e6tdyS1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
TPF00137e6tdyT1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
UPF00137e6tdyU1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
VPF00137e6tdyV1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
WPF00137e6tdyW1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
XPF00137e6tdyX1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
B3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
C3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
D2.40.10.170 Mainly Beta Beta Barrel Thrombin, subunit H CATH (utative)
D3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
D1.10.1140.10 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain Chain D, domain3CATH (utative)
E2.40.10.170 Mainly Beta Beta Barrel Thrombin, subunit H CATH (utative)
E3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
E1.10.1140.10 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain Chain D, domain3CATH (utative)
F2.40.10.170 Mainly Beta Beta Barrel Thrombin, subunit H CATH (utative)
F3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
F1.10.1140.10 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain Chain D, domain3CATH (utative)
O1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
P1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
Q1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
R1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
S1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
T1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
U1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
V1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
W1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
X1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)