6TC6
Crystal structure of MutM from Neisseria meningitidis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01149 | e6tc6A1 | A: beta barrels | X: MutM N-terminal domain-like | H: N-terminal domain of MutM-like DNA repair proteins (From Topology) | T: N-terminal domain of MutM-like DNA repair proteins | F: PF01149 | ECOD (1.6) |
A | PF06831 | e6tc6A3 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: PF06831 | ECOD (1.6) |
A | PF06827 | e6tc6A2 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: C-terminal, Zn-finger domain of MutM-like DNA repair proteins (From Topology) | T: C-terminal, Zn-finger domain of MutM-like DNA repair proteins | F: PF06827 | ECOD (1.6) |
B [auth C] | PF01149 | e6tc6C1 | A: beta barrels | X: MutM N-terminal domain-like | H: N-terminal domain of MutM-like DNA repair proteins (From Topology) | T: N-terminal domain of MutM-like DNA repair proteins | F: PF01149 | ECOD (1.6) |
B [auth C] | PF06831 | e6tc6C2 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: PF06831 | ECOD (1.6) |
B [auth C] | PF06827 | e6tc6C3 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: C-terminal, Zn-finger domain of MutM-like DNA repair proteins (From Topology) | T: C-terminal, Zn-finger domain of MutM-like DNA repair proteins | F: PF06827 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C] | PF06827 | Zinc finger found in FPG and IleRS (zf-FPG_IleRS) | Zinc finger found in FPG and IleRS | This zinc binding domain is found at the C-terminus of isoleucyl tRNA synthetase and the enzyme Formamidopyrimidine-DNA glycosylase EC:3.2.2.23. | Domain |
A, B [auth C] | PF01149 | Formamidopyrimidine-DNA glycosylase N-terminal domain (Fapy_DNA_glyco) | Formamidopyrimidine-DNA glycosylase N-terminal domain | Formamidopyrimidine-DNA glycosylase (Fpg) is a DNA repair enzyme that excises oxidised purines from damaged DNA. This family is the N-terminal domain contains eight beta-strands, forming a beta-sandwich with two alpha-helices parallel to its edges [1 ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C] | IPR000214 | Zinc finger, DNA glycosylase/AP lyase-type | Domain |
A, B [auth C] | IPR035937 | MutM-like, N-terminal | Homologous Superfamily |
A, B [auth C] | IPR015887 | DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site | Binding Site |
A, B [auth C] | IPR012319 | Formamidopyrimidine-DNA glycosylase, catalytic domain | Domain |
A, B [auth C] | IPR020629 | Formamidopyrimidine-DNA glycosylase | Family |
A, B [auth C] | IPR015886 | DNA glycosylase/AP lyase, H2TH DNA-binding | Domain |
A, B [auth C] | IPR010663 | Zinc finger, FPG/IleRS-type | Domain |
A, B [auth C] | IPR010979 | Small ribosomal subunit protein uS13-like, H2TH | Homologous Superfamily |