6SWH
Crystal structure of the ternary complex between the type 1 pilus proteins FimC, FimI and FimA from E. coli
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Periplasmic chaperone C-domain | 8035665 | 3000998 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PapD-like | 8055315 | 3002067 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Periplasmic chaperone C-domain | 8035665 | 3000998 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | PapD-like | 8055315 | 3002067 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Bacterial adhesin-like | 8098656 | 3000723 | SCOP2B (2022-06-29) |
E | SCOP2 Family | Pilus subunits | 8098655 | 4002034 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | Bacterial adhesin-like | 8098656 | 3000723 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Bacterial adhesin-like | 8098074 | 3000723 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Bacterial adhesin-like | 8098074 | 3000723 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PapD_C | e6swhA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PapD_C | ECOD (1.6) |
A | PapD_N | e6swhA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PapD_N | ECOD (1.6) |
D | PapD_C | e6swhD2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PapD_C | ECOD (1.6) |
D | PapD_N | e6swhD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PapD_N | ECOD (1.6) |
B | Fimbrial_1 | e6swhB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: Fimbrial_1 | ECOD (1.6) |
E | Fimbrial_1 | e6swhE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: Fimbrial_1 | ECOD (1.6) |
C | Fimbrial_1 | e6swhC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: Fimbrial_1 | ECOD (1.6) |
F | Fimbrial_1 | e6swhF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: Fimbrial_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02753 | Pili assembly chaperone PapD, C-terminal domain (PapD_C) | Pili assembly chaperone PapD, C-terminal domain | Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD. | Domain | |
PF00345 | Pili and flagellar-assembly chaperone, PapD N-terminal domain (PapD_N) | Pili and flagellar-assembly chaperone, PapD N-terminal domain | C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly. | Domain | |
PF00419 | Fimbrial protein (Fimbrial) | Fimbrial protein | - | Domain | |
PF00419 | Fimbrial protein (Fimbrial) | Fimbrial protein | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036316 | Pili assembly chaperone, C-terminal domain superfamily | Homologous Superfamily | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR016148 | Pili assembly chaperone, C-terminal | Domain | |
IPR008962 | PapD-like superfamily | Homologous Superfamily | |
IPR016147 | Pili assembly chaperone, N-terminal | Domain | |
IPR001829 | Pili assembly chaperone, bacterial | Family | |
IPR018046 | Pili assembly chaperone, conserved site | Conserved Site | |
IPR000259 | Fimbrial-type adhesion domain | Domain | |
IPR036937 | Fimbrial-type adhesion domain superfamily | Homologous Superfamily | |
IPR008966 | Adhesion domain superfamily | Homologous Superfamily | |
IPR000259 | Fimbrial-type adhesion domain | Domain | |
IPR036937 | Fimbrial-type adhesion domain superfamily | Homologous Superfamily | |
IPR008966 | Adhesion domain superfamily | Homologous Superfamily |