6SW8
Crystal structure of the NS1 (H7N1) RNA-binding domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6sw8a1 | All alpha proteins | S15/NS1 RNA-binding domain | S15/NS1 RNA-binding domain | N-terminal, RNA-binding domain of nonstructural protein NS1 | automated matches | (Influenza A virus (A/turkey/Italy/977/1999(H7N1)) ) [TaxId: 437402 ], | SCOPe (2.08) |
A | d6sw8a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Influenza A virus (A/turkey/Italy/977/1999(H7N1)) ) [TaxId: 437402 ], | SCOPe (2.08) |
B | d6sw8b1 | All alpha proteins | S15/NS1 RNA-binding domain | S15/NS1 RNA-binding domain | N-terminal, RNA-binding domain of nonstructural protein NS1 | automated matches | (Influenza A virus (A/turkey/Italy/977/1999(H7N1)) ) [TaxId: 437402 ], | SCOPe (2.08) |
B | d6sw8b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Influenza A virus (A/turkey/Italy/977/1999(H7N1)) ) [TaxId: 437402 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00600 | e6sw8A1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF00600 | ECOD (1.6) |
B | PF00600 | e6sw8B1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF00600 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00600 | Influenza non-structural protein (NS1) (Flu_NS1) | Influenza non-structural protein (NS1) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038064 | Influenza A virus NS1, effector domain-like superfamily | Homologous Superfamily | |
IPR009068 | uS15/NS1, RNA-binding domain superfamily | Homologous Superfamily | |
IPR000256 | Influenza A virus NS1 protein | Family | |
IPR004208 | Influenza non-structural protein (NS1) | Family |