6PMG

Solution structure of the C-terminal zinc finger of the C. elegans protein MEX-5

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth X]	SCOP2 Family	CCCH zinc finger	8095160	4003893	SCOP2 (2022-06-29)
A [auth X]	SCOP2 Superfamily	CCCH zinc finger-like	8095161	3001741	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth X]	PF00642	e6pmgX1	A: few secondary structure elements	X: CCCH zinc finger	H: CCCH zinc finger (From Topology)	T: CCCH zinc finger	F: PF00642	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth X]	PF00642	Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH)	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth X]	Zinc finger protein mex-5	DNA binding binding organic cyclic compound binding nucleic acid binding protein binding protein domain specific binding kinase binding enzyme binding protein kinase binding poly-pyrimidine tract binding RNA binding single-stranded RNA binding mRNA 3'-UTR binding mRNA binding DNA binding binding organic cyclic compound binding nucleic acid binding protein binding protein domain specific binding kinase binding enzyme binding protein kinase binding poly-pyrimidine tract binding RNA binding single-stranded RNA binding mRNA 3'-UTR binding mRNA binding cation binding ion binding metal ion binding small molecule binding	protein localization regulation of localization regulation of biological process cellular localization regulation of cellular process regulation of protein localization biological regulation localization regulation of cellular localization cellular macromolecule localization macromolecule localization cellular process	intracellular anatomical structure P granule cytoplasmic ribonucleoprotein granule germ plasm cellular anatomical entity ribonucleoprotein granule intracellular organelle organelle pole plasm intracellular non-membrane-bounded organelle cytoplasm supramolecular complex non-membrane-bounded organelle centrosome intracellular anatomical structure P granule cytoplasmic ribonucleoprotein granule germ plasm cellular anatomical entity ribonucleoprotein granule intracellular organelle organelle pole plasm intracellular non-membrane-bounded organelle cytoplasm supramolecular complex non-membrane-bounded organelle centrosome microtubule organizing center cytoskeleton microtubule cytoskeleton cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth X]	IPR045877	RNA-binding protein ZFP36-like	Family
A [auth X]	IPR000571	Zinc finger, CCCH-type	Domain
A [auth X]	IPR036855	Zinc finger, CCCH-type superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.