6LKQ
The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8097404 | 3001397 | SCOP2B (2022-06-29) |
E | SCOP2 Family | Ribosomal protein S6 | 8102804 | 4001337 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | Ribosomal protein S6 | 8102805 | 3001323 | SCOP2 (2022-06-29) |
F | SCOP2 Family | Ribosomal protein S7 | 8095102 | 4001112 | SCOP2 (2022-06-29) |
F | SCOP2 Superfamily | Ribosomal protein S7 | 8095103 | 3000799 | SCOP2 (2022-06-29) |
K | SCOP2 Family | Cold shock DNA-binding domain-like | 8094644 | 4001909 | SCOP2 (2022-06-29) |
K | SCOP2 Superfamily | Nucleic acid-binding proteins | 8094645 | 3000135 | SCOP2 (2022-06-29) |
M | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8093698 | 3000068 | SCOP2B (2022-06-29) |
O | SCOP2 Family | Ribosomal protein S16 | 8096013 | 4001077 | SCOP2 (2022-06-29) |
O | SCOP2 Superfamily | Ribosomal protein S16 | 8096014 | 3000680 | SCOP2 (2022-06-29) |
W | SCOP2 Family | Ribosomal protein L4 | 8098029 | 4003628 | SCOP2 (2022-06-29) |
W | SCOP2 Superfamily | Ribosomal protein L4 | 8098030 | 3001146 | SCOP2 (2022-06-29) |
X | SCOP2 Family | Ribosomal protein L5 | 8097875 | 4001498 | SCOP2 (2022-06-29) |
X | SCOP2 Superfamily | RL5-like | 8097876 | 3001709 | SCOP2 (2022-06-29) |
BA [auth 1] | SCOP2 Family | Ribosomal protein L14 | 8100867 | 4001826 | SCOP2 (2022-06-29) |
BA [auth 1] | SCOP2 Superfamily | 50S Ribosomal protein L14-like | 8100868 | 3000433 | SCOP2 (2022-06-29) |
CA [auth 2] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8096018 | 3001045 | SCOP2B (2022-06-29) |
JA [auth a] | SCOP2 Family | Ribosomal protein L22 | 8097767 | 4001212 | SCOP2 (2022-06-29) |
JA [auth a] | SCOP2 Superfamily | Ribosomal protein L22 | 8097768 | 3001078 | SCOP2 (2022-06-29) |
LA [auth c] | SCOP2 Family | Ribosomal proteins L24p and L21e | 8097765 | 4001752 | SCOP2 (2022-06-29) |
LA [auth c] | SCOP2 Superfamily | Translation proteins SH3-like KOW motif containing domain | 8097766 | 3000334 | SCOP2 (2022-06-29) |
OA [auth f] | SCOP2 Family | Ribosomal protein L28 | 8093475 | 4003961 | SCOP2 (2022-06-29) |
OA [auth f] | SCOP2 Superfamily | L28p-like | 8093476 | 3001966 | SCOP2 (2022-06-29) |
RA [auth i] | SCOP2 Family | Ribosomal protein L32p | 8093521 | 4000508 | SCOP2 (2022-06-29) |
RA [auth i] | SCOP2 Superfamily | Zn-binding ribosomal proteins | 8093522 | 3001320 | SCOP2 (2022-06-29) |
N | SCOP2 Family | 30S Ribosomal protein S15 / 40S Ribosomal protein S13 | 8093417 | 4000767 | SCOP2 (2022-06-29) |
N | SCOP2 Superfamily | S15/NS1 RNA-binding domain | 8093418 | 3001284 | SCOP2 (2022-06-29) |
P | SCOP2 Family | Cold shock DNA-binding domain-like | 8095074 | 4001909 | SCOP2 (2022-06-29) |
P | SCOP2 Superfamily | Nucleic acid-binding proteins | 8095075 | 3000135 | SCOP2 (2022-06-29) |
R | SCOP2 Family | Ribosomal protein S19 | 8094057 | 4001081 | SCOP2 (2022-06-29) |
R | SCOP2 Superfamily | Ribosomal protein S19 | 8094058 | 3000686 | SCOP2 (2022-06-29) |
T | SCOP2 Family | Ribosomal protein S21 | 8093477 | 4006173 | SCOP2 (2022-06-29) |
T | SCOP2 Superfamily | Ribosomal protein S21 | 8093478 | 3002159 | SCOP2 (2022-06-29) |
V | SCOP2 Family | Ribosomal protein L3 | 8093569 | 4002103 | SCOP2 (2022-06-29) |
V | SCOP2 Superfamily | Translational proteins | 8093570 | 3000811 | SCOP2 (2022-06-29) |
AA [auth 0] | SCOP2 Family | Ribosomal protein L13 | 8100807 | 4003623 | SCOP2 (2022-06-29) |
AA [auth 0] | SCOP2 Superfamily | Ribosomal protein L13 | 8100808 | 3001134 | SCOP2 (2022-06-29) |
C | SCOP2 Family | Ribosomal protein S4 | 8096837 | 4001399 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Alpha-L RNA-binding motif | 8096838 | 3001473 | SCOP2 (2022-06-29) |
DA [auth 3] | SCOP2 Family | Ribosomal protein L16p | 8097881 | 4003717 | SCOP2 (2022-06-29) |
DA [auth 3] | SCOP2 Superfamily | Ribosomal protein L16p/L10e | 8097882 | 3000884 | SCOP2 (2022-06-29) |
FA [auth 5] | SCOP2 Family | Ribosomal protein L18p and S11 | 8097877 | 4000555 | SCOP2 (2022-06-29) |
FA [auth 5] | SCOP2 Superfamily | Translational machinery components | 8097878 | 3000571 | SCOP2 (2022-06-29) |
IA [auth 9] | SCOP2 Family | Ribosomal protein l21p | 8093587 | 4001630 | SCOP2 (2022-06-29) |
IA [auth 9] | SCOP2 Superfamily | l21p-like | 8093588 | 3002005 | SCOP2 (2022-06-29) |
KA [auth b] | SCOP2 Family | L23p | 8093681 | 4000943 | SCOP2 (2022-06-29) |
KA [auth b] | SCOP2 Superfamily | Ribosomal proteins S24e L23 and L15e | 8093682 | 3000210 | SCOP2 (2022-06-29) |
MA [auth d] | SCOP2 Family | Ribosomal protein L25-like | 8093525 | 4002376 | SCOP2 (2022-06-29) |
MA [auth d] | SCOP2 Superfamily | Ribosomal protein L25-like | 8093526 | 3001161 | SCOP2 (2022-06-29) |
PA [auth g] | SCOP2 Family | Ribosomal protein L29 (L29p) | 8097945 | 4000600 | SCOP2 (2022-06-29) |
PA [auth g] | SCOP2 Superfamily | Ribosomal protein L29 (L29p) | 8097946 | 3000713 | SCOP2 (2022-06-29) |
UA [auth l] | SCOP2 Family | Ribosomal protein L35p | 8093583 | 4003406 | SCOP2 (2022-06-29) |
UA [auth l] | SCOP2 Superfamily | L35p-like | 8093584 | 3000790 | SCOP2 (2022-06-29) |
VA [auth m] | SCOP2 Family | Ribosomal protein L36 | 8093553 | 4003715 | SCOP2 (2022-06-29) |
VA [auth m] | SCOP2 Superfamily | Ribosomal protein L36 | 8093554 | 3001346 | SCOP2 (2022-06-29) |
WA [auth n] | SCOP2 Family | Ribosomal protein L10-like | 8096579 | 4001998 | SCOP2 (2022-06-29) |
WA [auth n] | SCOP2 Superfamily | Ribosomal protein L10-like | 8096580 | 3000665 | SCOP2 (2022-06-29) |
G | SCOP2 Family | Ribosomal protein S8 | 8095406 | 4002027 | SCOP2 (2022-06-29) |
G | SCOP2 Superfamily | Ribosomal protein S8 | 8095407 | 3000709 | SCOP2 (2022-06-29) |
H | SCOP2 Family | Translational machinery components | 8095228 | 4000951 | SCOP2 (2022-06-29) |
H | SCOP2 Superfamily | Ribosomal protein S5 domain 2-like | 8095229 | 3000100 | SCOP2 (2022-06-29) |
I | SCOP2 Family | Ribosomal protein S10 | 8095176 | 4001240 | SCOP2 (2022-06-29) |
I | SCOP2 Superfamily | Ribosomal protein S10 | 8095177 | 3001336 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00318 | e6lkqA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: PF00318 | ECOD (1.6) |
B | PF00189 | e6lkqB2 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: PF00189 | ECOD (1.6) |
B | PF07650 | e6lkqB1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: PF07650 | ECOD (1.6) |
D | PF03719 | e6lkqD1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF03719 | ECOD (1.6) |
D | PF00333 | e6lkqD2 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: PF00333 | ECOD (1.6) |
E | PF01250 | e6lkqE1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S6 (From Topology) | T: Ribosomal protein S6 | F: PF01250 | ECOD (1.6) |
F | PF00177 | e6lkqF1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: PF00177 | ECOD (1.6) |
K | PF00164 | e6lkqK1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00164 | ECOD (1.6) |
M | PF00253 | e6lkqM1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00253 | ECOD (1.6) |
O | PF00886 | e6lkqO1 | A: a+b two layers | X: Ribosomal protein S16 (From Topology) | H: Ribosomal protein S16 (From Topology) | T: Ribosomal protein S16 | F: PF00886 | ECOD (1.6) |
U | PF00181 | e6lkqU2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00181 | ECOD (1.6) |
U | PF03947 | e6lkqU1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF03947 | ECOD (1.6) |
W | PF00573 | e6lkqW1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: PF00573 | ECOD (1.6) |
X | PF00281,PF00673 | e6lkqX1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: PF00281,PF00673 | ECOD (1.6) |
Y | PF00347 | e6lkqY2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: PF00347 | ECOD (1.6) |
Z | PF00298 | e6lkqZ1 | A: alpha arrays | X: HTH | H: HTH | T: Ribosomal protein L11, C-terminal domain | F: PF00298 | ECOD (1.6) |
Z | PF03946 | e6lkqZ2 | A: a+b two layers | X: Ribosomal protein L11/L12e N-terminal domain-like | H: Ribosomal protein L11/L12e N-terminal domain (From Topology) | T: Ribosomal protein L11/L12e N-terminal domain | F: PF03946 | ECOD (1.6) |
BA [auth 1] | PF00238 | e6lkq11 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: PF00238 | ECOD (1.6) |
CA [auth 2] | PF00828 | e6lkq21 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: PF00828 | ECOD (1.6) |
EA [auth 4] | PF01196 | e6lkq41 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Prokaryotic ribosomal protein L17 (From Topology) | T: Prokaryotic ribosomal protein L17 | F: PF01196 | ECOD (1.6) |
HA [auth 8] | PF00453 | e6lkq81 | A: alpha arrays | X: PABP domain-like | H: Ribosomal protein L20 (From Topology) | T: Ribosomal protein L20 | F: PF00453 | ECOD (1.6) |
JA [auth a] | PF00237 | e6lkqa1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: PF00237 | ECOD (1.6) |
LA [auth c] | PF00467,PF17136 | e6lkqc1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00467,PF17136 | ECOD (1.6) |
NA [auth e] | PF01016 | e6lkqe1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal L27 protein | F: PF01016 | ECOD (1.6) |
OA [auth f] | PF00830 | e6lkqf1 | A: few secondary structure elements | X: Ribosomal protein bL28-related (From Homology) | H: Ribosomal protein bL28-related | T: Ribosomal protein L28 | F: PF00830 | ECOD (1.6) |
RA [auth i] | PF01783 | e6lkqi1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF01783 | ECOD (1.6) |
TA [auth k] | PF00468 | e6lkqk1 | A: extended segments | X: 50S ribosomal protein L34 (From Topology) | H: 50S ribosomal protein L34 (From Topology) | T: 50S ribosomal protein L34 | F: PF00468 | ECOD (1.6) |
J | PF00411 | e6lkqJ1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00411 | ECOD (1.6) |
L | PF00416 | e6lkqL1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: PF00416 | ECOD (1.6) |
N | PF00312 | e6lkqN1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF00312 | ECOD (1.6) |
P | PF00366 | e6lkqP1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00366 | ECOD (1.6) |
Q | PF01084 | e6lkqQ1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF01084 | ECOD (1.6) |
R | PF00203 | e6lkqR1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: PF00203 | ECOD (1.6) |
S | PF01649 | e6lkqS1 | A: alpha bundles | X: Spectrin repeat-like | H: Ribosomal protein S20 (From Topology) | T: Ribosomal protein S20 | F: PF01649 | ECOD (1.6) |
T | PF01165 | e6lkqT1 | A: extended segments | X: 30S ribosomal protein S21 (From Topology) | H: 30S ribosomal protein S21 (From Topology) | T: 30S ribosomal protein S21 | F: PF01165 | ECOD (1.6) |
V | PF00297 | e6lkqV1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF00297 | ECOD (1.6) |
AA [auth 0] | PF00572 | e6lkq01 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: PF00572 | ECOD (1.6) |
C | PF00163,PF01479 | e6lkqC1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: PF00163,PF01479 | ECOD (1.6) |
DA [auth 3] | PF00252 | e6lkq31 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: PF00252 | ECOD (1.6) |
FA [auth 5] | PF00861 | e6lkq51 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00861 | ECOD (1.6) |
GA [auth 6] | PF01245 | e6lkq61 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF01245 | ECOD (1.6) |
IA [auth 9] | PF00829 | e6lkq91 | A: beta barrels | X: Ribosomal protein L21p (From Topology) | H: Ribosomal protein L21p (From Topology) | T: Ribosomal protein L21p | F: PF00829 | ECOD (1.6) |
KA [auth b] | PF00276 | e6lkqb1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: PF00276 | ECOD (1.6) |
MA [auth d] | PF01386 | e6lkqd1 | A: beta barrels | X: Ribosomal protein L25-like | H: Ribosomal protein L25-like (From Topology) | T: Ribosomal protein L25-like | F: PF01386 | ECOD (1.6) |
PA [auth g] | PF00831 | e6lkqg1 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: PF00831 | ECOD (1.6) |
QA [auth h] | PF00327 | e6lkqh1 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: PF00327 | ECOD (1.6) |
SA [auth j] | PF00471 | e6lkqj1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF00471 | ECOD (1.6) |
UA [auth l] | PF01632 | e6lkql1 | A: a+b two layers | X: Ribosomal protein L35p (From Topology) | H: Ribosomal protein L35p (From Topology) | T: Ribosomal protein L35p | F: PF01632 | ECOD (1.6) |
VA [auth m] | PF00444 | e6lkqm1 | A: few secondary structure elements | X: Ribosomal protein L36 (From Topology) | H: Ribosomal protein L36 (From Topology) | T: Ribosomal protein L36 | F: PF00444 | ECOD (1.6) |
WA [auth n] | PF00466 | e6lkqn1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein L10-like (From Topology) | T: Ribosomal protein L10-like | F: PF00466 | ECOD (1.6) |
AB [auth r] | PF16320 | e6lkqr1 | A: alpha duplicates or obligate multimers | X: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | T: Ribosomal protein L7/12, oligomerisation (N-terminal) domain | F: PF16320 | ECOD (1.6) |
XA [auth o] | PF16320 | e6lkqo1 | A: alpha duplicates or obligate multimers | X: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | T: Ribosomal protein L7/12, oligomerisation (N-terminal) domain | F: PF16320 | ECOD (1.6) |
YA [auth p] | PF16320 | e6lkqp1 | A: alpha duplicates or obligate multimers | X: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | T: Ribosomal protein L7/12, oligomerisation (N-terminal) domain | F: PF16320 | ECOD (1.6) |
ZA [auth q] | PF16320 | e6lkqq1 | A: alpha duplicates or obligate multimers | X: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | T: Ribosomal protein L7/12, oligomerisation (N-terminal) domain | F: PF16320 | ECOD (1.6) |
EB [auth v] | PF22042 | e6lkqv3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF22042 | ECOD (1.6) |
EB [auth v] | PF16658 | e6lkqv1 | A: a+b two layers | X: Alpha-beta plaits | H: EF-G C-terminal domain-like (From Topology) | T: EF-G C-terminal domain-like | F: PF16658 | ECOD (1.6) |
EB [auth v] | PF00009 | e6lkqv2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00009 | ECOD (1.6) |
G | PF00410 | e6lkqG2 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: PF00410 | ECOD (1.6) |
G | PF00410 | e6lkqG1 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: PF00410 | ECOD (1.6) |
H | PF00380 | e6lkqH1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF00380 | ECOD (1.6) |
I | PF00338 | e6lkqI1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: PF00338 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family | |
PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family | |
PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | - | Domain | |
PF00181 | Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2) | Ribosomal Proteins L2, RNA binding domain | - | Domain | |
PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | - | Domain | |
BA [auth 1] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | - | Domain |
CA [auth 2] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | - | Family |
EA [auth 4] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
JA [auth a] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
LA [auth c] | PF17136 | Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24) | Ribosomal proteins 50S L24/mitochondrial 39S L24 | - | Family |
LA [auth c] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
RA [auth i] | PF01783 | Ribosomal L32p protein family (Ribosomal_L32p) | Ribosomal L32p protein family | - | Family |
PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family | |
PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | - | Domain | |
PF01165 | Ribosomal protein S21 (Ribosomal_S21) | Ribosomal protein S21 | - | Family | |
AA [auth 0] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family | |
PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain | |
KA [auth b] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
MA [auth d] | PF01386 | Ribosomal L25p family (Ribosomal_L25p) | Ribosomal L25p family | Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. | Domain |
VA [auth m] | PF00444 | Ribosomal protein L36 (Ribosomal_L36) | Ribosomal protein L36 | - | Domain |
WA [auth n] | PF00466 | Ribosomal protein L10 (Ribosomal_L10) | Ribosomal protein L10 | - | Family |
AB [auth r], XA [auth o], YA [auth p], ZA [auth q] | PF16320 | Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N) | Ribosomal protein L7/L12 dimerisation domain | This is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. | Domain |
EB [auth v] | PF00009 | Elongation factor Tu GTP binding domain (GTP_EFTU) | Elongation factor Tu GTP binding domain | This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. | Domain |
EB [auth v] | PF03144 | Elongation factor Tu domain 2 (GTP_EFTU_D2) | Elongation factor Tu domain 2 | Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ... | Domain |
EB [auth v] | PF16658 | Class II release factor RF3, C-terminal domain (RF3_C) | Class II release factor RF3, C-terminal domain | - | Domain |
PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | - | Domain | |
PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family | |
PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |