6H3J
Structural snapshots of the Type 9 protein translocon Plug-complex
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2 Family | T9SS Plug-like | 8060068 | 4005102 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | E set domains | 8102269 | 3000070 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | E set domains | 8102270 | 3000070 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Starch-binding domain-like | 8102271 | 3000816 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF00254 | e6h3jB1 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: PF00254 | ECOD (1.6) |
C | F_UNCLASSIFIED | e6h3jC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF17116 | e6h3jC3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF17116 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14349 | Motility related/secretion protein (SprA_N) | Motility related/secretion protein | - | Family | |
PF17116 | Type 9 secretion system plug protein 1st domain (T9SS_plug_1st) | Type 9 secretion system plug protein 1st domain | This is a family of Bacteroidetes proteins that appear to form a plug in the type 9 secretion system pore [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Protein involved in gliding motility SprA | - | - | - | |
Peptidyl-prolyl cis-trans isomerase | - | - | ||
Plug | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR026377 | Cell surface SprA | Family | |
IPR025684 | Gliding motility protein SprA N-terminal domain | Domain | |
IPR046357 | Peptidyl-prolyl cis-trans isomerase domain superfamily | Homologous Superfamily | |
IPR001179 | FKBP-type peptidyl-prolyl cis-trans isomerase domain | Domain | |
IPR031345 | Type 9 secretion system plug protein, N-terminal domain | Domain |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Beta-barrel transmembrane | Por protein secretin system | Gliding motility protein SprA complex |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Type IX Secretion Systems | SprA-based type IX (type 9) secretion system translocon |