6H3C
Cryo-EM structure of the BRISC complex bound to SHMT2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
I [auth E] | SCOP2B Superfamily | PLP-dependent transferases | 8036728 | 3000954 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | PLP-dependent transferases | 8036728 | 3000954 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e6h3cA1 | A: alpha bundles | X: BRCC36 C-terminal helical domain (From Topology) | H: BRCC36 C-terminal helical domain (From Topology) | T: BRCC36 C-terminal helical domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF21125 | e6h3cA2 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF21125 | ECOD (1.6) |
E [auth F] | F_UNCLASSIFIED | e6h3cF2 | A: alpha bundles | X: BRCC36 C-terminal helical domain (From Topology) | H: BRCC36 C-terminal helical domain (From Topology) | T: BRCC36 C-terminal helical domain | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth F] | PF21125 | e6h3cF1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF21125 | ECOD (1.6) |
B | PF18110 | e6h3cB1 | A: alpha bundles | X: BRCC36 C-terminal helical domain (From Topology) | H: BRCC36 C-terminal helical domain (From Topology) | T: BRCC36 C-terminal helical domain | F: PF18110 | ECOD (1.6) |
B | PF01398 | e6h3cB2 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF01398 | ECOD (1.6) |
F [auth G] | PF18110 | e6h3cG1 | A: alpha bundles | X: BRCC36 C-terminal helical domain (From Topology) | H: BRCC36 C-terminal helical domain (From Topology) | T: BRCC36 C-terminal helical domain | F: PF18110 | ECOD (1.6) |
F [auth G] | PF01398 | e6h3cG2 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF01398 | ECOD (1.6) |
C | PF06113 | e6h3cC1 | A: a+b two layers | X: UBC-like | H: UBC-like (From Topology) | T: UBC-like | F: PF06113 | ECOD (1.6) |
G [auth H] | PF06113 | e6h3cH1 | A: a+b two layers | X: UBC-like | H: UBC-like (From Topology) | T: UBC-like | F: PF06113 | ECOD (1.6) |
D | F_UNCLASSIFIED | e6h3cD1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: F_UNCLASSIFIED | ECOD (1.6) |
H [auth I] | F_UNCLASSIFIED | e6h3cI1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: F_UNCLASSIFIED | ECOD (1.6) |
I [auth E] | PF00464 | e6h3cE2 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: PF00464 | ECOD (1.6) |
I [auth E] | PF00464 | e6h3cE1 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: PF00464 | ECOD (1.6) |
J | PF00464 | e6h3cJ2 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: PF00464 | ECOD (1.6) |
J | PF00464 | e6h3cJ1 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: PF00464 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, E [auth F] | PF21125 | BRCA1-A complex subunit Abraxas 1 MPN domain (MPN_2A_DUB_like) | BRCA1-A complex subunit Abraxas 1 MPN domain | This entry represents the MPN domain from the Abraxas protein [1-3]. Abraxas is a component of the BRISC complex, a multiprotein complex that specifically cleaves 'Lys-63'-linked polyubiquitin, leaving the last ubiquitin chain attached to its substra ... | Domain |
B, F [auth G] | PF18110 | BRCC36 C-terminal helical domain (BRCC36_C) | BRCC36 C-terminal helical domain | This is the C-terminal domain of BRCC36, a Zn2+ dependent deubiquitinating enzyme, present in Camponotus floridanus. BRCC36 hydrolyzes lysine linked ubiquitin chains as part of macromolecular complexes that participate in either interferon signalling ... | Domain |
B, F [auth G] | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB) | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | - | Family |
C, G [auth H] | PF06113 | Brain and reproductive organ-expressed protein (BRE) (BRE) | Brain and reproductive organ-expressed protein (BRE) | - | Family |
I [auth E], J | PF00464 | Serine hydroxymethyltransferase (SHMT) | Serine hydroxymethyltransferase | - | Domain |