Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth B]SCOP2B SuperfamilyCep3/Upc2 domain-like8093129 3002679 SCOP2B (2022-06-29)
A [auth B]SCOP2B SuperfamilyARM repeat-like8093131 3000116 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCep3/Upc2 domain-like8093129 3002679 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyARM repeat-like8093131 3000116 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySkp1 dimerisation domain-like8043773 3000564 SCOP2B (2022-06-29)
ESCOP2B Superfamilylambda integrase clamp domain-like8053778 3000550 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyDNA breaking-rejoining enzymes8053766 3001127 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]PF16846e6gyuB1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF16846ECOD (1.6)
A [auth B]PF00172e6gyuB2 A: few secondary structure elementsX: Zn2/Cys6 DNA-binding domain (From Topology)H: Zn2/Cys6 DNA-binding domain (From Topology)T: Zn2/Cys6 DNA-binding domainF: PF00172ECOD (1.6)
CPF16846e6gyuC1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF16846ECOD (1.6)
DPF01466,PF03931e6gyuD1 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: PF01466,PF03931ECOD (1.6)
EPF16787e6gyuE1 A: alpha arraysX: HTHH: HTHT: DNA breaking-rejoining enzymesF: PF16787ECOD (1.6)
EPF21400e6gyuE3 A: alpha arraysX: lambda integrase-N-likeH: lambda integrase-N (From Topology)T: lambda integrase-NF: PF21400ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1 Chain ACATH (utative)
E1.10.443.20 Mainly Alpha Orthogonal Bundle hpI Integrase Chain ACATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B]PF00172Fungal Zn(2)-Cys(6) binuclear cluster domain (Zn_clus)Fungal Zn(2)-Cys(6) binuclear cluster domain- Domain
A [auth B]PF16846Centromere DNA-binding protein complex CBF3 subunit B (Cep3)Centromere DNA-binding protein complex CBF3 subunit B- Family
PF00172Fungal Zn(2)-Cys(6) binuclear cluster domain (Zn_clus)Fungal Zn(2)-Cys(6) binuclear cluster domain- Domain
PF16846Centromere DNA-binding protein complex CBF3 subunit B (Cep3)Centromere DNA-binding protein complex CBF3 subunit B- Family
PF01466Skp1 family, dimerisation domain (Skp1)Skp1 family, dimerisation domain- Domain
PF21400Ndc10 N-terminal domain (Ndc10_N)Ndc10 N-terminal domainKinetochores link centromeric DNA to spindle microtubules and ensure faithful chromosome segregation during mitosis. In point-centromere yeasts, the CBF3 complex Skp1-Ctf13-(Cep3)(2)-(Ndc10)recognizes a conserved centromeric DNA element through conta ...Kinetochores link centromeric DNA to spindle microtubules and ensure faithful chromosome segregation during mitosis. In point-centromere yeasts, the CBF3 complex Skp1-Ctf13-(Cep3)(2)-(Ndc10)recognizes a conserved centromeric DNA element through contacts made by Cep3 and Ndc10. This entry represents the N-terminal domain of Ndc10.
Domain
PF16787Centromere DNA-binding protein complex CBF3 subunit, domain 2 (NDC10_II)Centromere DNA-binding protein complex CBF3 subunit, domain 2NDC10_II is a the second of five domains on the Kluyveromyces lactis Ndc10 protein. Each subunit of the Ndc10 dimer binds a separate fragment of DNA, suggesting that Ndc10 stabilises a DNA loop at the centromere [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B]Centromere DNA-binding protein complex CBF3 subunit B
B [auth A]Centromere DNA-binding protein complex CBF3 subunit C
Centromere DNA-binding protein complex CBF3 subunit B
Suppressor of kinetochore protein 1
Centromere DNA-binding protein complex CBF3 subunit A