6F4A
Yeast mitochondrial RNA degradosome complex mtEXO
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e6f4aA4 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF00773 | e6f4aA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00773 | ECOD (1.6) |
A | F_UNCLASSIFIED | e6f4aA2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF12513 | e6f4aB3 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF12513 | ECOD (1.6) |
B | F_UNCLASSIFIED | e6f4aB6 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Phosphoprotein XD domain (From Topology) | T: Phosphoprotein XD domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e6f4aB1 | A: alpha complex topology | X: Sigma2 domain-like | H: Sigma2 domain of RNA polymerase sigma factors (From Topology) | T: Sigma2 domain of RNA polymerase sigma factors | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e6f4aB5 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF00271 | e6f4aB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00271 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00773 | RNB domain (RNB) | RNB domain | This domain is the catalytic domain of ribonuclease II [1]. | Domain | |
PF00270 | DEAD/DEAH box helicase (DEAD) | DEAD/DEAH box helicase | Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ... | Domain | |
PF12513 | Mitochondrial degradasome RNA helicase subunit C terminal (SUV3_C) | Mitochondrial degradasome RNA helicase subunit C terminal | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001900 | Ribonuclease II/R | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR001650 | Helicase, C-terminal domain-like | Domain | |
IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain | |
IPR044774 | Suv3, DEXQ-box helicase domain | Domain | |
IPR022192 | Mitochondrial degradasome RNA helicase subunit, C-terminal domain | Domain | |
IPR011545 | DEAD/DEAH box helicase domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |