6ELC

Crystal Structure of O-linked Glycosylated VSG3

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF13206e6elcA1 A: a+b complex topologyX: VSG (variant surface glycoprotein) N-terminal domain (From Topology)H: VSG (variant surface glycoprotein) N-terminal domain (From Topology)T: VSG (variant surface glycoprotein) N-terminal domainF: PF13206ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF13206Trypanosomal VSG domain (VSG_B)Trypanosomal VSG domainThis family represents the B-type variant surface glycoproteins from trypanosomal parasites. This family is related to Pfam:PF00913.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Variant surface glycoprotein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR025932Trypanosome variant surface glycoprotein, B-type, N-terminal domainDomain
IPR019609Trypanosome variant surface glycoprotein, C-terminalDomain

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
mpstrucMONOTOPIC MEMBRANE PROTEINSVariant Surface Glycoproteins (VSG)N-terminal Domain of VSG3