Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyBromodomain8084245 3001843 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWD40 repeat-like8051194 3001694 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CPF00439e6bnbC1 A: alpha bundlesX: Bromodomain-likeH: Bromodomain (From Topology)T: BromodomainF: PF00439ECOD (1.6)
APF03178,PF10433e6bnbA2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF03178,PF10433ECOD (1.6)
APF10433e6bnbA1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF10433ECOD (1.6)
APF03178e6bnbA3 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF03178ECOD (1.6)
BPF02190e6bnbB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: PF02190ECOD (1.6)
BPF03226e6bnbB2 A: beta complex topologyX: ETN0001 domain-like (From Homology)H: ETN0001 domain-likeT: Mss4-likeF: PF03226ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00439Bromodomain (Bromodomain)BromodomainBromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine [3].Domain
PF03178CPSF A subunit region (CPSF_A)CPSF A subunit region- Repeat
PF02190ATP-dependent protease La (LON) substrate-binding domain (LON_substr_bdg)ATP-dependent protease La (LON) substrate-binding domain- Family
PF03226Yippee zinc-binding/DNA-binding /Mis18, centromere assembly (Yippee-Mis18)Yippee zinc-binding/DNA-binding /Mis18, centromere assemblyThis family includes both Yippee-type proteins and Mis18 kinetochore proteins. Yippee are putative zinc-binding/DNA-binding proteins. Mis18 are proteins involved in the priming of centromeres for recruiting CENP-A. Mis18-alpha and beta form part of ...This family includes both Yippee-type proteins and Mis18 kinetochore proteins. Yippee are putative zinc-binding/DNA-binding proteins. Mis18 are proteins involved in the priming of centromeres for recruiting CENP-A. Mis18-alpha and beta form part of a small complex with Mis18-binding protein. Mis18-alpha is found to interact with DNA de-methylases through a Leu-rich region located at its carboxyl terminus [5]. This entry also includes the CULT domain proteins such as Cereblon [6].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Bromodomain-containing protein 4
DNA damage-binding protein 1
Protein cereblon

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosO60885
PharosQ16531
PharosQ96SW2