5ZV6

Solution structure of peptide cQ2 from Chenopodium quinoa

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5zv6a_	Small proteins	Knottins (small inhibitors, toxins, lectins)	Plant lectins/antimicrobial peptides	Antimicrobial peptide 2, AC-AMP2	automated matches	(Chenopodium quinoa ) [TaxId: 63459 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Antimicrobial peptide 2 AC-AMP2	8094604	4003047	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Plant lectins/antimicrobial peptides	8094605	3000195	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00187	e5zv6A1	A: few secondary structure elements	X: omega toxin-like	H: omega toxin-related	T: Plant lectins/antimicrobial peptides	F: PF00187	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00187	Chitin recognition protein (Chitin_bind_1)	Chitin recognition protein	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	cQ2	chitin binding binding carbohydrate derivative binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001002	Chitin-binding, type 1	Domain
A	IPR018371	Chitin-binding, type 1, conserved site	Conserved Site
A	IPR036861	Endochitinase-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.