5Z81
Trimeric structure of Vibrio cholerae Heat Shock Protein 15 at 2.3 Angstrom resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5z81a_ | Alpha and beta proteins (a+b) | Alpha-L RNA-binding motif | Alpha-L RNA-binding motif | Heat shock protein 15 kD | automated matches | (Vibrio cholerae O395 ) [TaxId: 345073 ], | SCOPe (2.08) |
B | d5z81b_ | Alpha and beta proteins (a+b) | Alpha-L RNA-binding motif | Alpha-L RNA-binding motif | Heat shock protein 15 kD | automated matches | (Vibrio cholerae O395 ) [TaxId: 345073 ], | SCOPe (2.08) |
C | d5z81c_ | Alpha and beta proteins (a+b) | Alpha-L RNA-binding motif | Alpha-L RNA-binding motif | Heat shock protein 15 kD | automated matches | (Vibrio cholerae O395 ) [TaxId: 345073 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Heat shock protein 15 kD | 8075917 | 4001401 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Alpha-L RNA-binding motif | 8075918 | 3001473 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8075918 | 3001473 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8075918 | 3001473 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01479 | e5z81A1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: PF01479 | ECOD (1.6) |
B | PF01479 | e5z81B1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: PF01479 | ECOD (1.6) |
C | PF01479 | e5z81C1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: PF01479 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.290.10 | Alpha Beta | Roll | Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region | Chain A | CATH (4.3.0) |
B | 3.10.290.10 | Alpha Beta | Roll | Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region | Chain A | CATH (4.3.0) |
C | 3.10.290.10 | Alpha Beta | Roll | Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Heat shock protein 15 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002942 | RNA-binding S4 domain | Domain | |
IPR036986 | RNA-binding S4 domain superfamily | Homologous Superfamily | |
IPR025708 | Heat shock protein 15 | Family |