5YS2
Structure of the domain IV(D_IV) of Pseudorabies virus glycoprotein B( PRV gB)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00606 | e5ys2A1 | A: beta complex topology | X: Viral glycoprotein ectodomain-like (From Topology) | H: Viral glycoprotein ectodomain-like (From Topology) | T: Viral glycoprotein ectodomain-like | F: PF00606 | ECOD (1.6) |
B | PF00606 | e5ys2B1 | A: beta complex topology | X: Viral glycoprotein ectodomain-like (From Topology) | H: Viral glycoprotein ectodomain-like (From Topology) | T: Viral glycoprotein ectodomain-like | F: PF00606 | ECOD (1.6) |
C | PF00606 | e5ys2C1 | A: beta complex topology | X: Viral glycoprotein ectodomain-like (From Topology) | H: Viral glycoprotein ectodomain-like (From Topology) | T: Viral glycoprotein ectodomain-like | F: PF00606 | ECOD (1.6) |
D | PF00606 | e5ys2D1 | A: beta complex topology | X: Viral glycoprotein ectodomain-like (From Topology) | H: Viral glycoprotein ectodomain-like (From Topology) | T: Viral glycoprotein ectodomain-like | F: PF00606 | ECOD (1.6) |
E | PF00606 | e5ys2E1 | A: beta complex topology | X: Viral glycoprotein ectodomain-like (From Topology) | H: Viral glycoprotein ectodomain-like (From Topology) | T: Viral glycoprotein ectodomain-like | F: PF00606 | ECOD (1.6) |
F | PF00606 | e5ys2F1 | A: beta complex topology | X: Viral glycoprotein ectodomain-like (From Topology) | H: Viral glycoprotein ectodomain-like (From Topology) | T: Viral glycoprotein ectodomain-like | F: PF00606 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.30.1230 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
B | 2.30.30.1230 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
C | 2.30.30.1230 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
D | 2.30.30.1230 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
E | 2.30.30.1230 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
F | 2.30.30.1230 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000234 | Herpesvirus Glycoprotein B | Family | |
IPR035381 | Herpesvirus Glycoprotein B, PH-like domain 2 | Domain | |
IPR035377 | Herpesvirus Glycoprotein B, PH-like domain 1 | Domain | |
IPR038631 | Herpesvirus Glycoprotein B, PH-like domain 2 superfamily | Homologous Superfamily |