5X3T
VapBC from Mycobacterium tuberculosis
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01402 | e5x3tA1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: PF01402 | ECOD (1.6) |
B [auth C] | PF01402 | e5x3tC1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: PF01402 | ECOD (1.6) |
C [auth E] | PF01402 | e5x3tE1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: PF01402 | ECOD (1.6) |
D [auth G] | PF01402 | e5x3tG1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: PF01402 | ECOD (1.6) |
F [auth D] | PF01850 | e5x3tD1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: PIN domain-like | F: PF01850 | ECOD (1.6) |
E [auth B] | PF01850 | e5x3tB1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: PIN domain-like | F: PF01850 | ECOD (1.6) |
G [auth F] | PF01850 | e5x3tF1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: PIN domain-like | F: PF01850 | ECOD (1.6) |
H | PF01850 | e5x3tH1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: PIN domain-like | F: PF01850 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C], C [auth E], D [auth G] | PF01402 | Ribbon-helix-helix protein, copG family (RHH_1) | Ribbon-helix-helix protein, copG family | The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement [2]. The helix-turn-helix-like structure is involved in dimerisation and not DNA b ... | Domain |
E [auth B], F [auth D], G [auth F], H | PF01850 | PIN domain (PIN) | PIN domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C], C [auth E], D [auth G] | IPR010985 | Ribbon-helix-helix | Homologous Superfamily |
A, B [auth C], C [auth E], D [auth G] | IPR002145 | Ribbon-helix-helix protein, CopG | Domain |
E [auth B], F [auth D], G [auth F], H | IPR002716 | PIN domain | Domain |
E [auth B], F [auth D], G [auth F], H | IPR029060 | PIN-like domain superfamily | Homologous Superfamily |
E [auth B], F [auth D], G [auth F], H | IPR022907 | VapC family | Family |