Annotations: 5ODV

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	PepMV Coat protein-like	8089902	4005718	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2 (2022-06-29)
AA [auth N]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
CA [auth O]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
E [auth C]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
EA [auth P]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
G [auth D]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
GA [auth Q]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
I [auth E]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
IA [auth R]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
K [auth F]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
KA [auth S]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
M [auth G]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
MA [auth T]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
O [auth H]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
OA [auth U]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
Q [auth I]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
QA [auth V]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
S [auth J]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
SA [auth W]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
U [auth K]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
UA [auth X]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
W [auth L]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)
Y [auth M]	SCOP2B Superfamily	PepMV Coat protein-like	8089901	3002401	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00767	e5odvA1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
AA [auth N]	PF00767	e5odvN1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
C [auth B]	PF00767	e5odvB1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
CA [auth O]	PF00767	e5odvO1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
E [auth C]	PF00767	e5odvC1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
EA [auth P]	PF00767	e5odvP1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
G [auth D]	PF00767	e5odvD1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
GA [auth Q]	PF00767	e5odvQ1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
I [auth E]	PF00767	e5odvE1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
IA [auth R]	PF00767	e5odvR1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
K [auth F]	PF00767	e5odvF1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
KA [auth S]	PF00767	e5odvS1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
M [auth G]	PF00767	e5odvG1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
MA [auth T]	PF00767	e5odvT1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
O [auth H]	PF00767	e5odvH1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
OA [auth U]	PF00767	e5odvU1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
Q [auth I]	PF00767	e5odvI1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
QA [auth V]	PF00767	e5odvV1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
S [auth J]	PF00767	e5odvJ1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
SA [auth W]	PF00767	e5odvW1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
U [auth K]	PF00767	e5odvK1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
UA [auth X]	PF00767	e5odvX1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
W [auth L]	PF00767	e5odvL1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)
Y [auth M]	PF00767	e5odvM1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: PF00767	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth N], C [auth B], CA [auth O], E [auth C], A, AA [auth N], C [auth B], CA [auth O], E [auth C], EA [auth P], G [auth D], GA [auth Q], I [auth E], IA [auth R], K [auth F], KA [auth S], M [auth G], MA [auth T], O [auth H], OA [auth U], Q [auth I], QA [auth V], S [auth J], SA [auth W], U [auth K], UA [auth X], W [auth L], Y [auth M]	PF00767	Potyvirus coat protein (Poty_coat)	Potyvirus coat protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth N], C [auth B], CA [auth O], E [auth C], A, AA [auth N], C [auth B], CA [auth O], E [auth C], EA [auth P], G [auth D], GA [auth Q], I [auth E], IA [auth R], K [auth F], KA [auth S], M [auth G], MA [auth T], O [auth H], OA [auth U], Q [auth I], QA [auth V], S [auth J], SA [auth W], U [auth K], UA [auth X], W [auth L], Y [auth M]	coat protein	-	-	viral capsid virion component
B [auth a], BA [auth n], D [auth b], DA [auth o], F [auth c], B [auth a], BA [auth n], D [auth b], DA [auth o], F [auth c], FA [auth p], H [auth d], HA [auth q], J [auth e], JA [auth r], L [auth f], LA [auth s], N [auth g], NA [auth t], P [auth h], PA [auth u], R [auth i], RA [auth v], T [auth j], TA [auth w], V [auth k], VA [auth x], X [auth l], Z [auth m]	RNA (5'-R(PUPUPUPUP*U)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth N], C [auth B], CA [auth O], E [auth C], A, AA [auth N], C [auth B], CA [auth O], E [auth C], EA [auth P], G [auth D], GA [auth Q], I [auth E], IA [auth R], K [auth F], KA [auth S], M [auth G], MA [auth T], O [auth H], OA [auth U], Q [auth I], QA [auth V], S [auth J], SA [auth W], U [auth K], UA [auth X], W [auth L], Y [auth M]	IPR001592	Potyvirus coat protein	Family