Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF18694e5mrgA1 A: a+b two layersX: beta-GraspH: TAR DNA-binding protein 43 N-terminal domain (From Topology)T: TAR DNA-binding protein 43 N-terminal domainF: PF18694ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF18694TAR DNA-binding protein 43, N-terminal domain (TDP43_N)TAR DNA-binding protein 43, N-terminal domainThis is the N-terminal domain of transactive response DNA-binding protein 43 kDa (TDP-43), an RNA transporting and processing protein whose aberrant aggregates are implicated in neurodegenerative diseases. TDP-43 N-terminal domain has been shown to p ...This is the N-terminal domain of transactive response DNA-binding protein 43 kDa (TDP-43), an RNA transporting and processing protein whose aberrant aggregates are implicated in neurodegenerative diseases. TDP-43 N-terminal domain has been shown to play an important role in the aggregation of TDP-43 monomers and its loss of function affects the RNA metabolic levels. Secondary structure of the N-terminal domain consists of six beta-strands and it resembles axin 1 [1-3]. This domain is known to mediate TDP-43 dimerization. This region is followed by a nuclear localization sequence (NLS) which links the N-terminal domain with the RNA recognition motif 1 (RRM1).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
TAR DNA-binding protein 43