5LI2

bacteriophage phi812K1-420 tail sheath and tail tube protein in native tail

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	F_UNCLASSIFIED	e5li2A2	A: beta sandwiches	X: Tail sheath protein beta-sandwich domain (From Topology)	H: Tail sheath protein beta-sandwich domain (From Topology)	T: Tail sheath protein beta-sandwich domain	F: F_UNCLASSIFIED	ECOD (1.6)
A	F_UNCLASSIFIED	e5li2A3	A: a+b duplicates or obligate multimers	X: Creatinase/aminopeptidase-like	H: gpW/gp25-like (From Topology)	T: gpW/gp25-like	F: F_UNCLASSIFIED	ECOD (1.6)
A	F_UNCLASSIFIED	e5li2A1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Domain III of tail sheath protein Gp18 (From Topology)	T: Domain III of tail sheath protein Gp18	F: F_UNCLASSIFIED	ECOD (1.6)
B	F_UNCLASSIFIED	e5li2B2	A: beta sandwiches	X: Tail sheath protein beta-sandwich domain (From Topology)	H: Tail sheath protein beta-sandwich domain (From Topology)	T: Tail sheath protein beta-sandwich domain	F: F_UNCLASSIFIED	ECOD (1.6)
B	F_UNCLASSIFIED	e5li2B1	A: a+b duplicates or obligate multimers	X: Creatinase/aminopeptidase-like	H: gpW/gp25-like (From Topology)	T: gpW/gp25-like	F: F_UNCLASSIFIED	ECOD (1.6)
B	F_UNCLASSIFIED	e5li2B3	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Domain III of tail sheath protein Gp18 (From Topology)	T: Domain III of tail sheath protein Gp18	F: F_UNCLASSIFIED	ECOD (1.6)
C	F_UNCLASSIFIED	e5li2C1	A: beta sandwiches	X: Tail sheath protein beta-sandwich domain (From Topology)	H: Tail sheath protein beta-sandwich domain (From Topology)	T: Tail sheath protein beta-sandwich domain	F: F_UNCLASSIFIED	ECOD (1.6)
C	F_UNCLASSIFIED	e5li2C3	A: a+b duplicates or obligate multimers	X: Creatinase/aminopeptidase-like	H: gpW/gp25-like (From Topology)	T: gpW/gp25-like	F: F_UNCLASSIFIED	ECOD (1.6)
C	F_UNCLASSIFIED	e5li2C2	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Domain III of tail sheath protein Gp18 (From Topology)	T: Domain III of tail sheath protein Gp18	F: F_UNCLASSIFIED	ECOD (1.6)
D	F_UNCLASSIFIED	e5li2D2	A: beta sandwiches	X: Tail sheath protein beta-sandwich domain (From Topology)	H: Tail sheath protein beta-sandwich domain (From Topology)	T: Tail sheath protein beta-sandwich domain	F: F_UNCLASSIFIED	ECOD (1.6)
D	F_UNCLASSIFIED	e5li2D3	A: a+b duplicates or obligate multimers	X: Creatinase/aminopeptidase-like	H: gpW/gp25-like (From Topology)	T: gpW/gp25-like	F: F_UNCLASSIFIED	ECOD (1.6)
D	F_UNCLASSIFIED	e5li2D1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Domain III of tail sheath protein Gp18 (From Topology)	T: Domain III of tail sheath protein Gp18	F: F_UNCLASSIFIED	ECOD (1.6)
E	F_UNCLASSIFIED	e5li2E2	A: beta sandwiches	X: Tail sheath protein beta-sandwich domain (From Topology)	H: Tail sheath protein beta-sandwich domain (From Topology)	T: Tail sheath protein beta-sandwich domain	F: F_UNCLASSIFIED	ECOD (1.6)
E	F_UNCLASSIFIED	e5li2E3	A: a+b duplicates or obligate multimers	X: Creatinase/aminopeptidase-like	H: gpW/gp25-like (From Topology)	T: gpW/gp25-like	F: F_UNCLASSIFIED	ECOD (1.6)
E	F_UNCLASSIFIED	e5li2E1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Domain III of tail sheath protein Gp18 (From Topology)	T: Domain III of tail sheath protein Gp18	F: F_UNCLASSIFIED	ECOD (1.6)
F	F_UNCLASSIFIED	e5li2F3	A: beta sandwiches	X: Tail sheath protein beta-sandwich domain (From Topology)	H: Tail sheath protein beta-sandwich domain (From Topology)	T: Tail sheath protein beta-sandwich domain	F: F_UNCLASSIFIED	ECOD (1.6)
F	F_UNCLASSIFIED	e5li2F2	A: a+b duplicates or obligate multimers	X: Creatinase/aminopeptidase-like	H: gpW/gp25-like (From Topology)	T: gpW/gp25-like	F: F_UNCLASSIFIED	ECOD (1.6)
F	F_UNCLASSIFIED	e5li2F1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Domain III of tail sheath protein Gp18 (From Topology)	T: Domain III of tail sheath protein Gp18	F: F_UNCLASSIFIED	ECOD (1.6)
G	PF09393	e5li2G1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Phage tail proteins	F: PF09393	ECOD (1.6)
H	PF09393	e5li2H1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Phage tail proteins	F: PF09393	ECOD (1.6)
I	PF09393	e5li2I1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Phage tail proteins	F: PF09393	ECOD (1.6)
J	PF09393	e5li2J1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Phage tail proteins	F: PF09393	ECOD (1.6)
K	PF09393	e5li2K1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Phage tail proteins	F: PF09393	ECOD (1.6)
L	PF09393	e5li2L1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Phage tail proteins	F: PF09393	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
G, H, I, J, K G, H, I, J, K, L	PF09393	Phage tail tube protein (DUF2001)	Phage tail tube protein	This is a family of phage tail tube proteins including protein XkdM from phage-like element PBSX protein (Swiss:P54332) whose structure adopts a beta barrel flanked with alpha helical regions.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
G, H, I, J, K G, H, I, J, K, L	IPR018989	Phage tail tube protein	Family
G, H, I, J, K G, H, I, J, K, L	IPR038628	XkdM-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

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5LI2

bacteriophage phi812K1-420 tail sheath and tail tube protein in native tail

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage