5KCS

Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth 1F]SCOP2B SuperfamilyRibosomal protein L48096356 3001146 SCOP2B (2022-06-29)
F [auth 1G]SCOP2B SuperfamilyRL5-like8096352 3001709 SCOP2B (2022-06-29)
G [auth 1H]SCOP2B SuperfamilyRibosomal protein L68035397 3000724 SCOP2B (2022-06-29)
G [auth 1H]SCOP2B SuperfamilyRibosomal protein L68035398 3000724 SCOP2B (2022-06-29)
K [auth 1K]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like8032963 3000950 SCOP2B (2022-06-29)
K [auth 1K]SCOP2B SuperfamilyRibosomal protein L11 C-terminal domain8032961 3001186 SCOP2B (2022-06-29)
M [auth 1O]SCOP2B Superfamily50S Ribosomal protein L14-like8103358 3000433 SCOP2B (2022-06-29)
O [auth 1Q]SCOP2B SuperfamilyRibosomal protein L16p/L10e8096366 3000884 SCOP2B (2022-06-29)
P [auth 1R]SCOP2B SuperfamilyProkaryotic ribosomal protein L178035409 3000995 SCOP2B (2022-06-29)
T [auth 1V]SCOP2B Superfamilyl21p-like8096354 3002005 SCOP2B (2022-06-29)
BA [auth 13]SCOP2B SuperfamilyRibosomal protein L30p/L7e8096372 3001378 SCOP2B (2022-06-29)
DA [auth 15]SCOP2B SuperfamilyZn-binding ribosomal proteins8096380 3001320 SCOP2B (2022-06-29)
EA [auth 16]SCOP2B SuperfamilyZn-binding ribosomal proteins8096362 3001320 SCOP2B (2022-06-29)
LA [auth 1d]SCOP2B SuperfamilyAlpha-L RNA-binding motif8083400 3001473 SCOP2B (2022-06-29)
OA [auth 1g]SCOP2B SuperfamilyRibosomal protein S78077979 3000799 SCOP2B (2022-06-29)
RA [auth 1j]SCOP2B SuperfamilyRibosomal protein S108102681 3001336 SCOP2B (2022-06-29)
WA [auth 1o]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8032375 3001284 SCOP2B (2022-06-29)
YA [auth 1q]SCOP2B SuperfamilyNucleic acid-binding proteins8059276 3000135 SCOP2B (2022-06-29)
AB [auth 1s]SCOP2B SuperfamilyRibosomal protein S198103915 3000686 SCOP2B (2022-06-29)
J [auth 1J]SCOP2B SuperfamilyRibosomal protein L10-like8079773 3000665 SCOP2B (2022-06-29)
L [auth 1N]SCOP2B SuperfamilyRibosomal protein L138096350 3001134 SCOP2B (2022-06-29)
N [auth 1P]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8070553 3001045 SCOP2B (2022-06-29)
Q [auth 1S]SCOP2B SuperfamilyTranslational machinery components8032969 3000571 SCOP2B (2022-06-29)
R [auth 1T]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096364 3000334 SCOP2B (2022-06-29)
S [auth 1U]SCOP2B SuperfamilyRibosomal protein L208096382 3000563 SCOP2B (2022-06-29)
U [auth 1W]SCOP2B SuperfamilyRibosomal protein L228096336 3001078 SCOP2B (2022-06-29)
V [auth 1X]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8035415 3000210 SCOP2B (2022-06-29)
W [auth 1Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096358 3000334 SCOP2B (2022-06-29)
X [auth 1Z]SCOP2B SuperfamilyRibosomal protein L25-like8042538 3001161 SCOP2B (2022-06-29)
Y [auth 10]SCOP2B SuperfamilyRibosomal L27 protein-like8096338 3000539 SCOP2B (2022-06-29)
Z [auth 11]SCOP2B SuperfamilyL28p-like8035424 3001966 SCOP2B (2022-06-29)
AA [auth 12]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8096370 3000713 SCOP2B (2022-06-29)
CA [auth 14]SCOP2B SuperfamilyL28p-like8032740 3001966 SCOP2B (2022-06-29)
C [auth 1D]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8035393 3000334 SCOP2B (2022-06-29)
C [auth 1D]SCOP2B SuperfamilyNucleic acid-binding proteins8035394 3000135 SCOP2B (2022-06-29)
GA [auth 18]SCOP2B SuperfamilyL35p-like8035388 3000790 SCOP2B (2022-06-29)
HA [auth 19]SCOP2B SuperfamilyRibosomal protein L368035391 3001346 SCOP2B (2022-06-29)
JA [auth 1b]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063838 3001397 SCOP2B (2022-06-29)
D [auth 1E]SCOP2B SuperfamilyTranslational proteins8032955 3000811 SCOP2B (2022-06-29)
NA [auth 1f]SCOP2B SuperfamilyRibosomal protein S68066495 3001323 SCOP2B (2022-06-29)
PA [auth 1h]SCOP2B SuperfamilyRibosomal protein S88079059 3000709 SCOP2B (2022-06-29)
QA [auth 1i]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082661 3000100 SCOP2B (2022-06-29)
SA [auth 1k]SCOP2B SuperfamilyTranslational machinery components8035368 3000571 SCOP2B (2022-06-29)
TA [auth 1l]SCOP2B SuperfamilyNucleic acid-binding proteins8106545 3000135 SCOP2B (2022-06-29)
UA [auth 1m]SCOP2B SuperfamilyS13-like H2TH domain8098358 3000053 SCOP2B (2022-06-29)
VA [auth 1n]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052568 3000068 SCOP2B (2022-06-29)
XA [auth 1p]SCOP2B SuperfamilyRibosomal protein S168106547 3000680 SCOP2B (2022-06-29)
CB [auth 1u]SCOP2B SuperfamilyRibosomal protein S218053090 3002159 SCOP2B (2022-06-29)
I [auth 1I]SCOP2B SuperfamilyRibosomal protein L9 C-domain8032958 3000329 SCOP2B (2022-06-29)
I [auth 1I]SCOP2B SuperfamilyL9 N-domain-like8032960 3000338 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth 1F]Ribosomal_L4e5kcs1F1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
F [auth 1G]Ribosomal_L5_Ce5kcs1G1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
G [auth 1H]Ribosomal_L6e5kcs1H2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
G [auth 1H]Ribosomal_L6_1e5kcs1H1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
K [auth 1K]Ribosomal_L11e5kcs1K1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
K [auth 1K]Ribosomal_L11_Ne5kcs1K2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
M [auth 1O]Ribosomal_L14e5kcs1O1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
O [auth 1Q]Ribosomal_L16e5kcs1Q1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
P [auth 1R]Ribosomal_L17_1e5kcs1R1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
T [auth 1V]Ribosomal_L21pe5kcs1V1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
BA [auth 13]Ribosomal_L30e5kcs131 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
DA [auth 15]Ribosomal_L32pe5kcs151 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
EA [auth 16]Ribosomal_L33e5kcs161 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
LA [auth 1d]S4e5kcs1d1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
MA [auth 1e]Ribosomal_S5_Ce5kcs1e1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
MA [auth 1e]Ribosomal_S5e5kcs1e2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
OA [auth 1g]Ribosomal_S7_1e5kcs1g1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
RA [auth 1j]Ribosomal_S10e5kcs1j1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
WA [auth 1o]Ribosomal_S15_1e5kcs1o1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
YA [auth 1q]Ribosomal_S17_1e5kcs1q1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
AB [auth 1s]Ribosomal_S19e5kcs1s1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
J [auth 1J]Ribosomal_L10e5kcs1J1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
L [auth 1N]Ribosomal_L13e5kcs1N1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
N [auth 1P]Ribosomal_L27Ae5kcs1P1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
Q [auth 1S]Ribosomal_L18pe5kcs1S1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
R [auth 1T]Ribosomal_L19e5kcs1T1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
S [auth 1U]Ribosomal_L20e5kcs1U1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
U [auth 1W]Ribosomal_L22e5kcs1W1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
V [auth 1X]Ribosomal_L23_2e5kcs1X1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
W [auth 1Y]ribosomal_L24_1e5kcs1Y1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
X [auth 1Z]Ribosomal_L25pe5kcs1Z1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
Y [auth 10]Ribosomal_L27e5kcs101 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
Z [auth 11]Ribosomal_L28e5kcs111 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
AA [auth 12]Ribosomal_L29e5kcs121 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
CA [auth 14]Ribosomal_L31e5kcs141 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
C [auth 1D]Ribosomal_L2_1e5kcs1D1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
C [auth 1D]Ribosomal_L2_Ce5kcs1D2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
FA [auth 17]Ribosomal_L34e5kcs171 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
GA [auth 18]Ribosomal_L35pe5kcs181 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
HA [auth 19]Ribosomal_L36e5kcs191 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
JA [auth 1b]Ribosomal_S2e5kcs1b1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
KA [auth 1c]Ribosomal_S3_Ce5kcs1c2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
KA [auth 1c]KH_2_1e5kcs1c1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
D [auth 1E]Ribosomal_L3e5kcs1E1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
NA [auth 1f]Ribosomal_S6e5kcs1f1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
PA [auth 1h]Ribosomal_S8_Ne5kcs1h1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
PA [auth 1h]Ribosomal_S8_Ce5kcs1h2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
QA [auth 1i]Ribosomal_S9e5kcs1i1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
SA [auth 1k]Ribosomal_S11e5kcs1k1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
TA [auth 1l]Ribosom_S12_S23e5kcs1l1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
UA [auth 1m]Ribosomal_S13_1e5kcs1m1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
VA [auth 1n]Ribosomal_S14_1e5kcs1n1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
XA [auth 1p]Ribosomal_S16e5kcs1p1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
ZA [auth 1r]Ribosomal_S18e5kcs1r1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
BB [auth 1t]Ribosomal_S20pe5kcs1t1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
CB [auth 1u]Ribosomal_S21e5kcs1u1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: Ribosomal_S21ECOD (1.6)
EB [auth 1w]GTP_EFTU_D2e5kcs1w4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2ECOD (1.6)
EB [auth 1w]UNK_F_TYPEe5kcs1w2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: UNK_F_TYPEECOD (1.6)
EB [auth 1w]EFG_Ce5kcs1w5 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_CECOD (1.6)
EB [auth 1w]EFG_IIe5kcs1w3 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_IIECOD (1.6)
EB [auth 1w]MnmE_helical_2nde5kcs1w1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
H [auth 1L]Ribosomal_L12e5kcs1L1 A: a+b two layersX: ClpS-likeH: ClpS-related (From Topology)T: ClpS-relatedF: Ribosomal_L12ECOD (1.6)
I [auth 1I]Ribosomal_L9_Ne5kcs1I1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
I [auth 1I]Ribosomal_L9_C_1e5kcs1I2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_C_1ECOD (1.6)

AMR Gene: CARD Annotation CARD Database Homepage

ChainsAccessionShort NameDescriptionProvenance Source (Version)
EB [auth 1w]ARO:3000186tet(M)Tet(M) is a ribosomal protection protein that confers tetracycline resistance. It is found on transposable DNA elements and its horizontal transfer between bacterial species has been documented.CARD (3.2.9)

AMR Gene Family: CARD Annotation CARD Database Homepage

ChainsAccessionGene FamilyDrug Class Resistance MachanismProvenance Source (Version)
EB [auth 1w]ARO:0000002tetracycline-resistant ribosomal protection proteintetracycline antibioticantibiotic target protectionCARD (3.2.9)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth 1F]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth 1G]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
F [auth 1G]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
G [auth 1H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
K [auth 1K]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
K [auth 1K]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
M [auth 1O]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
O [auth 1Q]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
P [auth 1R]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
T [auth 1V]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
BA [auth 13]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
DA [auth 15]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
EA [auth 16]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
LA [auth 1d]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
LA [auth 1d]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
MA [auth 1e]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
MA [auth 1e]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
OA [auth 1g]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
RA [auth 1j]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
WA [auth 1o]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
YA [auth 1q]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
AB [auth 1s]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
J [auth 1J]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
L [auth 1N]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
N [auth 1P]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
Q [auth 1S]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
R [auth 1T]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
S [auth 1U]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
U [auth 1W]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
V [auth 1X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
W [auth 1Y]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
W [auth 1Y]PF00467KOW motif (KOW)KOW motif- Family
X [auth 1Z]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
Y [auth 10]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
Z [auth 11]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
AA [auth 12]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
CA [auth 14]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
C [auth 1D]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
C [auth 1D]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
FA [auth 17]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
GA [auth 18]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
HA [auth 19]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
JA [auth 1b]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
KA [auth 1c]PF07650KH domain (KH_2)KH domain- Domain
KA [auth 1c]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
D [auth 1E]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
NA [auth 1f]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
PA [auth 1h]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
QA [auth 1i]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
SA [auth 1k]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
TA [auth 1l]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
UA [auth 1m]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
VA [auth 1n]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
XA [auth 1p]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
ZA [auth 1r]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
BB [auth 1t]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
CB [auth 1u]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
EB [auth 1w]PF00679Elongation factor G C-terminus (EFG_C)Elongation factor G C-terminusThis domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold.Domain
EB [auth 1w]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
EB [auth 1w]PF14492Elongation Factor G, domain III (EFG_III)Elongation Factor G, domain IIIThis domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1].Domain
EB [auth 1w]PF03764Elongation factor G, domain IV (EFG_IV)Elongation factor G, domain IVThis domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold.Domain
H [auth 1L]PF00542Ribosomal protein L7/L12 C-terminal domain (Ribosomal_L12)Ribosomal protein L7/L12 C-terminal domain- Domain
I [auth 1I]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
I [auth 1I]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1A]23S Ribosomal RNA---
E [auth 1F]50S ribosomal protein L4
F [auth 1G]50S ribosomal protein L5
G [auth 1H]50S ribosomal protein L6
K [auth 1K]50S ribosomal protein L11
M [auth 1O]50S ribosomal protein L14
O [auth 1Q]50S ribosomal protein L16
P [auth 1R]50S ribosomal protein L17
T [auth 1V]50S ribosomal protein L21
BA [auth 13]50S ribosomal protein L30
DA [auth 15]50S ribosomal protein L32
EA [auth 16]50S ribosomal protein L33
LA [auth 1d]30S ribosomal protein S4
MA [auth 1e]30S ribosomal protein S5
OA [auth 1g]30S ribosomal protein S7
RA [auth 1j]30S ribosomal protein S10
WA [auth 1o]30S ribosomal protein S15
YA [auth 1q]30S ribosomal protein S17
AB [auth 1s]30S ribosomal protein S19
FB [auth 1x]P-site tRNA---
J [auth 1J]50S ribosomal protein L10
L [auth 1N]50S ribosomal protein L13
N [auth 1P]50S ribosomal protein L15
Q [auth 1S]50S ribosomal protein L18
R [auth 1T]50S ribosomal protein L19
S [auth 1U]50S ribosomal protein L20
B [auth 1B]5S Ribosomal RNA---
U [auth 1W]50S ribosomal protein L22
V [auth 1X]50S ribosomal protein L23
W [auth 1Y]50S ribosomal protein L24
X [auth 1Z]50S ribosomal protein L25
Y [auth 10]50S ribosomal protein L27
Z [auth 11]50S ribosomal protein L28
AA [auth 12]50S ribosomal protein L29
CA [auth 14]50S ribosomal protein L31
C [auth 1D]50S ribosomal protein L2
FA [auth 17]50S ribosomal protein L34
GA [auth 18]50S ribosomal protein L35
HA [auth 19]50S ribosomal protein L36
IA [auth 1a]16S Ribosomal RNA---
JA [auth 1b]30S ribosomal protein S2
KA [auth 1c]30S ribosomal protein S3
D [auth 1E]50S ribosomal protein L3
NA [auth 1f]30S ribosomal protein S6
PA [auth 1h]30S ribosomal protein S8
QA [auth 1i]30S ribosomal protein S9
SA [auth 1k]30S ribosomal protein S11
TA [auth 1l]30S ribosomal protein S12
UA [auth 1m]30S ribosomal protein S13
VA [auth 1n]30S ribosomal protein S14
XA [auth 1p]30S ribosomal protein S16
ZA [auth 1r]30S ribosomal protein S18
BB [auth 1t]30S ribosomal protein S20
CB [auth 1u]30S ribosomal protein S21
DB [auth 1v]mRNA---
EB [auth 1w]Tetracycline resistance protein TetM from transposon Tn916 -
H [auth 1L]50S ribosomal protein L7/L12
I [auth 1I]50S ribosomal protein L9

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth 1F]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth 1F]IPR002136Large ribosomal subunit protein uL4Family
E [auth 1F]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth 1G]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
F [auth 1G]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth 1G]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
F [auth 1G]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
F [auth 1G]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
F [auth 1G]IPR002132Large ribosomal subunit protein uL5Family
G [auth 1H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
G [auth 1H]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
G [auth 1H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
G [auth 1H]IPR000702Large ribosomal subunit protein uL6-likeFamily
G [auth 1H]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
K [auth 1K]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
K [auth 1K]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
K [auth 1K]IPR000911Ribosomal protein uL11Family
K [auth 1K]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
K [auth 1K]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
K [auth 1K]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
K [auth 1K]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
M [auth 1O]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
M [auth 1O]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
M [auth 1O]IPR000218Large ribosomal subunit protein uL14Family
M [auth 1O]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
O [auth 1Q]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
O [auth 1Q]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
O [auth 1Q]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
O [auth 1Q]IPR016180Large ribosomal subunit protein uL16 domainDomain
O [auth 1Q]IPR047873Large ribosomal subunit protein uL16Family
P [auth 1R]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
P [auth 1R]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
P [auth 1R]IPR000456Large ribosomal subunit protein bL17Family
T [auth 1V]IPR028909Large ribosomal subunit protein bL21-likeFamily
T [auth 1V]IPR001787Large ribosomal subunit protein bL21Family
T [auth 1V]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
T [auth 1V]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
BA [auth 13]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
BA [auth 13]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
BA [auth 13]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
BA [auth 13]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
DA [auth 15]IPR002677Large ribosomal subunit protein bL32Family
DA [auth 15]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA [auth 15]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
EA [auth 16]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EA [auth 16]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
EA [auth 16]IPR001705Large ribosomal subunit protein bL33Family
EA [auth 16]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
LA [auth 1d]IPR002942RNA-binding S4 domainDomain
LA [auth 1d]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
LA [auth 1d]IPR022801Small ribosomal subunit protein uS4Family
LA [auth 1d]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
LA [auth 1d]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
LA [auth 1d]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
MA [auth 1e]IPR000851Small ribosomal subunit protein uS5Family
MA [auth 1e]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
MA [auth 1e]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
MA [auth 1e]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
MA [auth 1e]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
MA [auth 1e]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
MA [auth 1e]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
OA [auth 1g]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
OA [auth 1g]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
OA [auth 1g]IPR000235Small ribosomal subunit protein uS7Family
OA [auth 1g]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
OA [auth 1g]IPR023798Small ribosomal subunit protein uS7 domainDomain
RA [auth 1j]IPR027486Small ribosomal subunit protein uS10 domainDomain
RA [auth 1j]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
RA [auth 1j]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
RA [auth 1j]IPR001848Small ribosomal subunit protein uS10Family
WA [auth 1o]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
WA [auth 1o]IPR000589Small ribosomal subunit protein uS15Family
WA [auth 1o]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
YA [auth 1q]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
YA [auth 1q]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
YA [auth 1q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
YA [auth 1q]IPR000266Small ribosomal subunit protein uS17Family
AB [auth 1s]IPR002222Small ribosomal subunit protein uS19Family
AB [auth 1s]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
AB [auth 1s]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AB [auth 1s]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
J [auth 1J]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
J [auth 1J]IPR001790Large ribosomal subunit protein uL10Family
J [auth 1J]IPR022973Large ribosomal subunit protein uL10, bacterialFamily
J [auth 1J]IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
J [auth 1J]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
L [auth 1N]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
L [auth 1N]IPR005822Large ribosomal subunit protein uL13Family
L [auth 1N]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
L [auth 1N]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
N [auth 1P]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
N [auth 1P]IPR021131Large ribosomal subunit protein uL15/eL18Domain
N [auth 1P]IPR030878Large ribosomal subunit protein uL15Family
N [auth 1P]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
N [auth 1P]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Q [auth 1S]IPR005484Large ribosomal subunit protein uL18Family
Q [auth 1S]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
R [auth 1T]IPR001857Large ribosomal subunit protein bL19Family
R [auth 1T]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
R [auth 1T]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
R [auth 1T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
S [auth 1U]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
S [auth 1U]IPR005813Large ribosomal subunit protein bL20Family
U [auth 1W]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
U [auth 1W]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
U [auth 1W]IPR001063Large ribosomal subunit protein uL22Family
U [auth 1W]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
U [auth 1W]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
V [auth 1X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
V [auth 1X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
V [auth 1X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
V [auth 1X]IPR013025Large ribosomal subunit protein uL23-likeFamily
W [auth 1Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
W [auth 1Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth 1Y]IPR003256Large ribosomal subunit protein uL24Family
W [auth 1Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
W [auth 1Y]IPR005824KOWDomain
W [auth 1Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
X [auth 1Z]IPR020055Ribosomal protein bL25, short-formFamily
X [auth 1Z]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
X [auth 1Z]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
X [auth 1Z]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
Y [auth 10]IPR001684Large ribosomal subunit protein bL27Family
Y [auth 10]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
Z [auth 11]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
Z [auth 11]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
Z [auth 11]IPR026569Large ribosomal subunit protein bL28Family
Z [auth 11]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AA [auth 12]IPR001854Large ribosomal subunit protein uL29Family
AA [auth 12]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
AA [auth 12]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
CA [auth 14]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
CA [auth 14]IPR027491Large ribosomal subunit protein bL31 type AFamily
CA [auth 14]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
CA [auth 14]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
C [auth 1D]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth 1D]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth 1D]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth 1D]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth 1D]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
C [auth 1D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth 1D]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth 1D]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth 1D]IPR002171Large ribosomal subunit protein uL2Family
FA [auth 17]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
FA [auth 17]IPR000271Large ribosomal subunit protein bL34Family
GA [auth 18]IPR021137Large ribosomal subunit protein bL35-likeFamily
GA [auth 18]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
GA [auth 18]IPR001706Large ribosomal subunit protein bL35Family
GA [auth 18]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
HA [auth 19]IPR000473Large ribosomal subunit protein bL36Family
HA [auth 19]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
JA [auth 1b]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
JA [auth 1b]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
JA [auth 1b]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
JA [auth 1b]IPR001865Small ribosomal subunit protein uS2Family
KA [auth 1c]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
KA [auth 1c]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
KA [auth 1c]IPR004087K Homology domainDomain
KA [auth 1c]IPR004044K Homology domain, type 2Domain
KA [auth 1c]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
KA [auth 1c]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
KA [auth 1c]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
KA [auth 1c]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
D [auth 1E]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth 1E]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth 1E]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth 1E]IPR000597Large ribosomal subunit protein uL3Family
NA [auth 1f]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
NA [auth 1f]IPR000529Small ribosomal subunit protein bS6Family
NA [auth 1f]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
NA [auth 1f]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
NA [auth 1f]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
PA [auth 1h]IPR000630Small ribosomal subunit protein uS8Family
PA [auth 1h]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
PA [auth 1h]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
QA [auth 1i]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
QA [auth 1i]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
QA [auth 1i]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
QA [auth 1i]IPR000754Small ribosomal subunit protein uS9Family
QA [auth 1i]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
SA [auth 1k]IPR001971Small ribosomal subunit protein uS11Family
SA [auth 1k]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
SA [auth 1k]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
SA [auth 1k]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
TA [auth 1l]IPR005679Ribosomal protein uS12, bacterial-typeFamily
TA [auth 1l]IPR006032Small ribosomal subunit protein uS12Family
TA [auth 1l]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UA [auth 1m]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
UA [auth 1m]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
UA [auth 1m]IPR001892Small ribosomal subunit protein uS13Family
UA [auth 1m]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
UA [auth 1m]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
VA [auth 1n]IPR001209Small ribosomal subunit protein uS14Family
VA [auth 1n]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
VA [auth 1n]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
XA [auth 1p]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
XA [auth 1p]IPR000307Small ribosomal subunit protein bS16Family
XA [auth 1p]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
ZA [auth 1r]IPR001648Small ribosomal subunit protein bS18Family
ZA [auth 1r]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
ZA [auth 1r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
BB [auth 1t]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
BB [auth 1t]IPR002583Small ribosomal subunit protein bS20Family
CB [auth 1u]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
CB [auth 1u]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
CB [auth 1u]IPR001911Small ribosomal subunit protein bS21Family
EB [auth 1w]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
EB [auth 1w]IPR035650Tetracycline resistance protein, C-terminalDomain
EB [auth 1w]IPR000795Translational (tr)-type GTP-binding domainDomain
EB [auth 1w]IPR000640Elongation factor EFG, domain V-likeDomain
EB [auth 1w]IPR031157Tr-type G domain, conserved siteConserved Site
EB [auth 1w]IPR035647EF-G domain III/V-likeHomologous Superfamily
EB [auth 1w]IPR041095Elongation Factor G, domain IIDomain
EB [auth 1w]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EB [auth 1w]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
EB [auth 1w]IPR005225Small GTP-binding protein domainDomain
EB [auth 1w]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
EB [auth 1w]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
H [auth 1L]IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
H [auth 1L]IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
H [auth 1L]IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
H [auth 1L]IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
H [auth 1L]IPR000206Large ribosomal subunit protein bL12Family
I [auth 1I]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
I [auth 1I]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
I [auth 1I]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
I [auth 1I]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
I [auth 1I]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
I [auth 1I]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
I [auth 1I]IPR000244Large ribosomal subunit protein bL9Family