5JB3

Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformation

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth M]	SCOP2 Family	Ribosomal protein L18p and S11	8098827	4000555	SCOP2 (2022-06-29)
B [auth M]	SCOP2 Superfamily	Translational machinery components	8098828	3000571	SCOP2 (2022-06-29)
D [auth Q]	SCOP2B Superfamily	Homeodomain-like	8052955	3000001	SCOP2B (2022-06-29)
D [auth Q]	SCOP2B Superfamily	S15/NS1 RNA-binding domain	8052956	3001284	SCOP2B (2022-06-29)
F [auth A]	SCOP2B Superfamily	Ribosomal S3Ae-like	8053209	3002166	SCOP2B (2022-06-29)
H [auth V]	SCOP2B Superfamily	Ribosomal proteins S24e L23 and L15e	8082571	3000210	SCOP2B (2022-06-29)
I [auth W]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8063782	3001320	SCOP2B (2022-06-29)
L [auth E]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8052754	3000334	SCOP2B (2022-06-29)
L [auth E]	SCOP2B Superfamily	Nucleic acid-binding proteins	8052753	3000135	SCOP2B (2022-06-29)
L [auth E]	SCOP2B Superfamily	Alpha-L RNA-binding motif	8052752	3001473	SCOP2B (2022-06-29)
N [auth G]	SCOP2B Superfamily	GS N-terminal domain-like	8053162	3000408	SCOP2B (2022-06-29)
O [auth I]	SCOP2B Superfamily	Ribosomal protein S8	8079067	3000709	SCOP2B (2022-06-29)
P [auth J]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8053085	3000433	SCOP2B (2022-06-29)
S [auth L]	SCOP2B Superfamily	Ribosomal protein S10	8098822	3001336	SCOP2B (2022-06-29)
T [auth O]	SCOP2B Superfamily	S13-like H2TH domain	8100260	3000053	SCOP2B (2022-06-29)
U [auth P]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8052588	3000068	SCOP2B (2022-06-29)
V [auth S]	SCOP2B Superfamily	Rps17e-like	8063510	3001852	SCOP2B (2022-06-29)
X [auth U]	SCOP2B Superfamily	Winged helix DNA-binding domain	8003150	3000034	SCOP2B (2022-06-29)
Z [auth Y]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8088663	3001320	SCOP2B (2022-06-29)
AA [auth H]	SCOP2 Family	Ribosomal protein S7	8065990	4001112	SCOP2 (2022-06-29)
AA [auth H]	SCOP2 Superfamily	Ribosomal protein S7	8065991	3000799	SCOP2 (2022-06-29)
GA [auth 6]	SCOP2B Superfamily	Nucleic acid-binding proteins	8085842	3000135	SCOP2B (2022-06-29)
HA [auth 7]	SCOP2B Superfamily	Ras-like P-loop GTPases	8056814	3002022	SCOP2B (2022-06-29)
HA [auth 7]	SCOP2B Superfamily	EF-Tu post-G domain-like	8056815	3002024	SCOP2B (2022-06-29)
HA [auth 7]	SCOP2B Superfamily	EF-Tu post-G domain-like	8056817	3002024	SCOP2B (2022-06-29)
JA [auth 9]	SCOP2B Superfamily	eIF2alpha middle domain-like	8037022	3001761	SCOP2B (2022-06-29)
JA [auth 9]	SCOP2B Superfamily	eIF-2-alpha C-terminal domain	8036122	3001618	SCOP2B (2022-06-29)
JA [auth 9]	SCOP2B Superfamily	Nucleic acid-binding proteins	8037024	3000135	SCOP2B (2022-06-29)
R [auth 3]	SCOP2B Superfamily	L30e-like	8033057	3001739	SCOP2B (2022-06-29)
BA [auth K]	SCOP2B Superfamily	Ribosomal protein S5 domain 2-like	8082675	3000100	SCOP2B (2022-06-29)
G [auth B]	SCOP2B Superfamily	SIS domain/Ribosomal protein S2-like	8063808	3001397	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth M]	PF00411	e5jb3M1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: PF00411	ECOD (1.6)
C [auth N]	PF00164	e5jb3N1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00164	ECOD (1.6)
D [auth Q]	PF08069	e5jb3Q1	A: alpha arrays	X: HTH	H: 40S ribosomal protein S13 N-terminal domain (From Topology)	T: 40S ribosomal protein S13 N-terminal domain	F: PF08069	ECOD (1.6)
D [auth Q]	PF00312	e5jb3Q2	A: alpha arrays	X: S15/NS1 RNA-binding domain (From Topology)	H: S15/NS1 RNA-binding domain (From Topology)	T: S15/NS1 RNA-binding domain	F: PF00312	ECOD (1.6)
E [auth R]	PF00366	e5jb3R1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00366	ECOD (1.6)
F [auth A]	PF01015	e5jb3A1	A: beta barrels	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain (From Topology)	T: 40S ribosomal protein S3A N-terminal domain	F: PF01015	ECOD (1.6)
F [auth A]	PF01015	e5jb3A2	A: a+b two layers	X: T-fold	H: 40S ribosomal protein S3A C-terminal domain (From Topology)	T: 40S ribosomal protein S3A C-terminal domain	F: PF01015	ECOD (1.6)
H [auth V]	PF01282	e5jb3V1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: PF01282	ECOD (1.6)
I [auth W]	PF01667	e5jb3W1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01667	ECOD (1.6)
J [auth Z]	PF00189	e5jb3Z2	A: a+b two layers	X: T-fold	H: Ribosomal protein S3-C (From Topology)	T: Ribosomal protein S3-C	F: PF00189	ECOD (1.6)
J [auth Z]	PF07650	e5jb3Z1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: PF07650	ECOD (1.6)
K [auth D]	PF00163,PF01479	e5jb3D1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: PF00163,PF01479	ECOD (1.6)
L [auth E]	PF00900	e5jb3E3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00900	ECOD (1.6)
L [auth E]	PF00467	e5jb3E2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF00467	ECOD (1.6)
L [auth E]	PF01479,PF08071	e5jb3E1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: PF01479,PF08071	ECOD (1.6)
M [auth F]	PF03719	e5jb3F3	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: PF03719	ECOD (1.6)
M [auth F]	PF00333	e5jb3F2	A: extended segments	X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	T: N-terminal region in 40S ribosomal protein rpS2 (S5p)	F: PF00333	ECOD (1.6)
N [auth G]	PF01092	e5jb3G1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: PF01092	ECOD (1.6)
O [auth I]	PF00410	e5jb3I2	A: a+b two layers	X: R3H domain-like	H: Ribosomal protein S8, N-terminal domain (From Topology)	T: Ribosomal protein S8, N-terminal domain	F: PF00410	ECOD (1.6)
O [auth I]	PF00410	e5jb3I1	A: a+b two layers	X: Ribosomal protein S8, C-terminal domain (From Topology)	H: Ribosomal protein S8, C-terminal domain (From Topology)	T: Ribosomal protein S8, C-terminal domain	F: PF00410	ECOD (1.6)
P [auth J]	PF01201	e5jb3J1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: PF01201	ECOD (1.6)
S [auth L]	PF00338	e5jb3L1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S10 (From Topology)	T: Ribosomal protein S10	F: PF00338	ECOD (1.6)
T [auth O]	PF00416	e5jb3O1	A: alpha arrays	X: HhH/H2TH	H: H2TH (From Topology)	T: H2TH	F: PF00416	ECOD (1.6)
U [auth P]	PF00253	e5jb3P1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: PF00253	ECOD (1.6)
V [auth S]	PF00833	e5jb3S1	A: alpha arrays	X: HTH	H: HTH	T: FF domain	F: PF00833	ECOD (1.6)
W [auth T]	PF00203	e5jb3T1	A: a+b two layers	X: Ribosomal protein S19 (From Topology)	H: Ribosomal protein S19 (From Topology)	T: Ribosomal protein S19	F: PF00203	ECOD (1.6)
X [auth U]	PF01090	e5jb3U1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF01090	ECOD (1.6)
Y [auth X]	PF01200	e5jb3X1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF01200	ECOD (1.6)
Z [auth Y]	PF01599	e5jb3Y1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01599	ECOD (1.6)
AA [auth H]	PF00177	e5jb3H1	A: alpha arrays	X: Ribosomal protein S7 (From Topology)	H: Ribosomal protein S7 (From Topology)	T: Ribosomal protein S7	F: PF00177	ECOD (1.6)
CA [auth 0]	F_UNCLASSIFIED	e5jb301	A: extended segments	X: Ribosomal protein L41-A (From Topology)	H: Ribosomal protein L41-A (From Topology)	T: Ribosomal protein L41-A	F: F_UNCLASSIFIED	ECOD (1.6)
FA [auth 1]	PF01253	e5jb311	A: a+b two layers	X: Glucose permease domain IIB-like	H: eIF1-like (From Topology)	T: eIF1-like	F: PF01253	ECOD (1.6)
GA [auth 6]	PF01176	e5jb361	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF01176	ECOD (1.6)
HA [auth 7]	F_UNCLASSIFIED	e5jb374	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: F_UNCLASSIFIED	ECOD (1.6)
HA [auth 7]	PF09173	e5jb372	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Aminomethyltransferase beta-barrel domain	F: PF09173	ECOD (1.6)
HA [auth 7]	PF00009	e5jb373	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00009	ECOD (1.6)
HA [auth 7]	F_UNCLASSIFIED	e5jb371	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: F_UNCLASSIFIED	ECOD (1.6)
IA [auth 8]	PF01873	e5jb382	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF01873	ECOD (1.6)
IA [auth 8]	PF01873	e5jb381	A: few secondary structure elements	X: Rubredoxin-like	H: Zinc-binding domain of translation initiation factor 2 beta (From Topology)	T: Zinc-binding domain of translation initiation factor 2 beta	F: PF01873	ECOD (1.6)
JA [auth 9]	PF00575	e5jb392	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00575	ECOD (1.6)
JA [auth 9]	PF07541	e5jb391	A: alpha arrays	X: HhH/H2TH	H: eIF2alpha middle domain (From Topology)	T: eIF2alpha middle domain	F: PF07541	ECOD (1.6)
JA [auth 9]	PF07541	e5jb393	A: a+b two layers	X: Alpha-beta plaits	H: eIF-2-alpha, C-terminal domain (From Topology)	T: eIF-2-alpha, C-terminal domain	F: PF07541	ECOD (1.6)
R [auth 3]	PF01248	e5jb331	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: PF01248	ECOD (1.6)
BA [auth K]	PF00380	e5jb3K1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: PF00380	ECOD (1.6)
G [auth B]	PF00318	e5jb3B1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Ribosomal protein S2/SIS domain (From Topology)	T: Ribosomal protein S2/SIS domain	F: PF00318	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth M]	PF00411	Ribosomal protein S11 (Ribosomal_S11)	Ribosomal protein S11	-	Family
C [auth N]	PF00164	Ribosomal protein S12/S23 (Ribosom_S12_S23)	Ribosomal protein S12/S23	-	Family
D [auth Q]	PF08069	Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)	Ribosomal S13/S15 N-terminal domain	This domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].	Domain
D [auth Q]	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15	-	Domain
E [auth R]	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17	-	Domain
F [auth A]	PF01015	Ribosomal S3Ae family (Ribosomal_S3Ae)	Ribosomal S3Ae family	-	Family
H [auth V]	PF01282	Ribosomal protein S24e (Ribosomal_S24e)	Ribosomal protein S24e	-	Family
I [auth W]	PF01667	Ribosomal protein S27 (Ribosomal_S27e)	Ribosomal protein S27	-	Family
J [auth Z]	PF07650	KH domain (KH_2)	KH domain	-	Domain
J [auth Z]	PF00189	Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)	Ribosomal protein S3, C-terminal domain	This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.	Domain
K [auth D]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
L [auth E]	PF00900	Ribosomal family S4e (Ribosomal_S4e)	Ribosomal family S4e	-	Family
L [auth E]	PF08071	RS4NT (NUC023) domain (RS4NT)	RS4NT (NUC023) domain	This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].	Domain
L [auth E]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
M [auth F]	PF03719	Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)	Ribosomal protein S5, C-terminal domain	-	Domain
M [auth F]	PF00333	Ribosomal protein S5, N-terminal domain (Ribosomal_S5)	Ribosomal protein S5, N-terminal domain	-	Domain
N [auth G]	PF01092	Ribosomal protein S6e (Ribosomal_S6e)	Ribosomal protein S6e	-	Family
O [auth I]	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8	-	Domain
P [auth J]	PF01201	Ribosomal protein S8e (Ribosomal_S8e)	Ribosomal protein S8e	-	Family
S [auth L]	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
T [auth O]	PF00416	Ribosomal protein S13/S18 (Ribosomal_S13)	Ribosomal protein S13/S18	-	Family
U [auth P]	PF00253	Ribosomal protein S14p/S29e (Ribosomal_S14)	Ribosomal protein S14p/S29e	-	Family
V [auth S]	PF00833	Ribosomal S17 (Ribosomal_S17e)	Ribosomal S17	-	Family
W [auth T]	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19	-	Domain
X [auth U]	PF01090	Ribosomal protein S19e (Ribosomal_S19e)	Ribosomal protein S19e	-	Family
Y [auth X]	PF01200	Ribosomal protein S28e (Ribosomal_S28e)	Ribosomal protein S28e	-	Family
Z [auth Y]	PF01599	Ribosomal protein S27a (Ribosomal_S27)	Ribosomal protein S27a	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].	Domain
AA [auth H]	PF00177	Ribosomal protein S7p/S5e (Ribosomal_S7)	Ribosomal protein S7p/S5e	This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.	Domain
FA [auth 1]	PF01253	Translation initiation factor SUI1 (SUI1)	Translation initiation factor SUI1	-	Domain
GA [auth 6]	PF01176	Translation initiation factor 1A / IF-1 (eIF-1a)	Translation initiation factor 1A / IF-1	This family includes both the eukaryotic translation factor eIF-1A and the bacterial translation initiation factor IF-1.	Domain
HA [auth 7]	PF00009	Elongation factor Tu GTP binding domain (GTP_EFTU)	Elongation factor Tu GTP binding domain	This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.	Domain
HA [auth 7]	PF09173	Initiation factor eIF2 gamma, C terminal (eIF2_C)	Initiation factor eIF2 gamma, C terminal	Members of this family, which are found in the initiation factors eIF2 and EF-Tu, adopt a structure consisting of a beta barrel with Greek key topology. They are required for formation of the ternary complex with GTP and initiator tRNA [1].	Domain
IA [auth 8]	PF01873	Domain found in IF2B/IF5 (eIF-5_eIF-2B)	Domain found in IF2B/IF5	-	Family
JA [auth 9]	PF07541	Eukaryotic translation initiation factor 2 alpha subunit (EIF_2_alpha)	Eukaryotic translation initiation factor 2 alpha subunit	-	Family
JA [auth 9]	PF00575	S1 RNA binding domain (S1)	S1 RNA binding domain	The S1 domain occurs in a wide range of RNA associated proteins. It is structurally similar to cold shock protein which binds nucleic acids. The S1 domain has an OB-fold structure.	Domain
R [auth 3]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
BA [auth K]	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
G [auth B]	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth M]	30S ribosomal protein S11	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
C [auth N]	30S ribosomal protein S12	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure small ribosomal subunit cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle
D [auth Q]	30S ribosomal protein S15	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
E [auth R]	30S ribosomal protein S17P	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	intracellular organelle intracellular anatomical structure cytosolic ribosome organelle intracellular non-membrane-bounded organelle ribosome cytoplasm cellular anatomical entity cytosol non-membrane-bounded organelle protein-containing complex ribonucleoprotein complex
F [auth A]	30S ribosomal protein S3Ae	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
H [auth V]	30S ribosomal protein S24e	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
I [auth W]	30S ribosomal protein S27e	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
J [auth Z]	30S ribosomal protein S3	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure small ribosomal subunit cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle
K [auth D]	30S ribosomal protein S4	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure small ribosomal subunit cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle
L [auth E]	30S ribosomal protein S4e	RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
M [auth F]	30S ribosomal protein S5	RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure small ribosomal subunit cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle cytosolic ribosome cytoplasm cytosol
N [auth G]	30S ribosomal protein S6e	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
O [auth I]	30S ribosomal protein S8	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
P [auth J]	30S ribosomal protein S8e	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
Q [auth C]	30S ribosomal protein SX	-	-	-
S [auth L]	30S ribosomal protein S10	RNA binding binding organic cyclic compound binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure small ribosomal subunit cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle
T [auth O]	30S ribosomal protein S13	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
U [auth P]	30S ribosomal protein S14 type Z	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure small ribosomal subunit cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle
V [auth S]	30S ribosomal protein S17e	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
W [auth T]	30S ribosomal protein S19	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure small ribosomal subunit cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle
X [auth U]	30S ribosomal protein S19e	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
Y [auth X]	30S ribosomal protein S28e	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
Z [auth Y]	30S ribosomal protein S27ae	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
AA [auth H]	30S ribosomal protein S7	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure small ribosomal subunit cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle
CA [auth 0]	30S ribosomal protein eL41	-	-	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
DA [auth 4]	initiator Met-tRNA fMet from E. coli (A1U72 variant)	-	-	-
EA [auth 5]	mRNA	-	-	-
FA [auth 1]	Protein translation factor SUI1 homolog	translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding RNA binding mRNA binding	ribonucleoprotein complex biogenesis cellular biosynthetic process organonitrogen compound biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly organic substance metabolic process protein-containing complex assembly organic substance biosynthetic process translational initiation cellular component organization or biogenesis protein metabolic process ribonucleoprotein complex biogenesis cellular biosynthetic process organonitrogen compound biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly organic substance metabolic process protein-containing complex assembly organic substance biosynthetic process translational initiation cellular component organization or biogenesis protein metabolic process formation of translation preinitiation complex organonitrogen compound metabolic process protein-containing complex organization cellular metabolic process primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process macromolecule metabolic process translation reinitiation	-
GA [auth 6]	Translation initiation factor 1A	translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding RNA binding	-	-
HA [auth 7]	Translation initiation factor 2 subunit gamma	translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding translation elongation factor activity RNA binding tRNA binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding translation elongation factor activity RNA binding tRNA binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding metal ion binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	ribonucleoprotein complex biogenesis cellular biosynthetic process organonitrogen compound biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly organic substance metabolic process protein-containing complex assembly organic substance biosynthetic process translational initiation cellular component organization or biogenesis protein metabolic process ribonucleoprotein complex biogenesis cellular biosynthetic process organonitrogen compound biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly organic substance metabolic process protein-containing complex assembly organic substance biosynthetic process translational initiation cellular component organization or biogenesis protein metabolic process formation of translation preinitiation complex organonitrogen compound metabolic process protein-containing complex organization cellular metabolic process primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process macromolecule metabolic process	-
IA [auth 8]	Translation initiation factor 2 subunit beta	translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding	ribonucleoprotein complex biogenesis cellular biosynthetic process organonitrogen compound biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly organic substance metabolic process protein-containing complex assembly organic substance biosynthetic process translational initiation cellular component organization or biogenesis protein metabolic process ribonucleoprotein complex biogenesis cellular biosynthetic process organonitrogen compound biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly organic substance metabolic process protein-containing complex assembly organic substance biosynthetic process translational initiation cellular component organization or biogenesis protein metabolic process formation of translation preinitiation complex organonitrogen compound metabolic process protein-containing complex organization cellular metabolic process primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process macromolecule metabolic process formation of cytoplasmic translation initiation complex	-
JA [auth 9]	Translation initiation factor 2 subunit alpha	translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding RNA binding ribonucleoprotein complex binding protein-containing complex binding ribosome binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process translational initiation metabolic process cellular process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process translational initiation metabolic process cellular process protein metabolic process macromolecule metabolic process	-
A [auth 2]	16S ribosomal RNA	-	-	-
R [auth 3]	50S ribosomal protein L7Ae	RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding tRNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity, producing 5'-phosphomonoesters catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity hydrolase activity catalytic activity, acting on a tRNA nuclease activity RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding tRNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity, producing 5'-phosphomonoesters catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity hydrolase activity catalytic activity, acting on a tRNA nuclease activity hydrolase activity, acting on ester bonds RNA endonuclease activity ribonuclease P activity endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters catalytic activity structural molecule activity structural constituent of ribosome	cellular biosynthetic process RNA metabolic process nucleobase-containing compound metabolic process organic substance metabolic process tRNA processing organic substance biosynthetic process RNA processing tRNA 5'-end processing cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process tRNA metabolic process cellular biosynthetic process RNA metabolic process nucleobase-containing compound metabolic process organic substance metabolic process tRNA processing organic substance biosynthetic process RNA processing tRNA 5'-end processing cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process tRNA metabolic process organic cyclic compound metabolic process biosynthetic process ncRNA metabolic process nucleic acid catabolic process RNA 5'-end processing metabolic process cellular process macromolecule metabolic process tRNA 5'-leader removal ribonucleoprotein complex biogenesis rRNA processing cellular component biogenesis ribosome biogenesis cellular component organization or biogenesis rRNA metabolic process organonitrogen compound metabolic process organonitrogen compound biosynthetic process translation protein metabolic process	protein-containing complex ribonucleoprotein complex intracellular anatomical structure cytoplasm cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle
BA [auth K]	30S ribosomal protein S9	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
G [auth B]	30S ribosomal protein S2	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure small ribosomal subunit cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth M]	IPR019961	Small ribosomal subunit protein uS11, archaeal	Family
B [auth M]	IPR001971	Small ribosomal subunit protein uS11	Family
B [auth M]	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
B [auth M]	IPR018102	Small ribosomal subunit protein uS11, conserved site	Conserved Site
C [auth N]	IPR006032	Small ribosomal subunit protein uS12	Family
C [auth N]	IPR022863	Ribosomal protein uS12, archaea	Family
C [auth N]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
C [auth N]	IPR005680	Small ribosomal subunit protein uS12, eukaryotic/archaeal	Family
D [auth Q]	IPR012606	Small ribosomal subunit protein uS15, N-terminal	Domain
D [auth Q]	IPR009068	uS15/NS1, RNA-binding domain superfamily	Homologous Superfamily
D [auth Q]	IPR023029	Small ribosomal subunit protein uS15, archaea/eukaryotes	Family
D [auth Q]	IPR000589	Small ribosomal subunit protein uS15	Family
E [auth R]	IPR019979	Small ribosomal subunit protein uS17, conserved site	Conserved Site
E [auth R]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
E [auth R]	IPR000266	Small ribosomal subunit protein uS17	Family
E [auth R]	IPR019978	Small ribosomal subunit protein uS17, archaeal	Family
E [auth R]	IPR028333	Small ribosomal subunit protein uS17, archaeal/eukaryotic	Family
F [auth A]	IPR001593	Small ribosomal subunit protein eS1	Family
F [auth A]	IPR018281	Small ribosomal subunit protein eS1, conserved site	Conserved Site
F [auth A]	IPR030838	Small ribosomal subunit protein eS1, archaeal	Family
H [auth V]	IPR001976	Small ribosomal subunit protein eS24	Family
H [auth V]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
H [auth V]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
H [auth V]	IPR018098	Small ribosomal subunit protein eS24 conserved site	Conserved Site
I [auth W]	IPR023407	Small ribosomal subunit protein eS27, zinc-binding domain superfamily	Homologous Superfamily
I [auth W]	IPR000592	Small ribosomal subunit protein eS27	Family
I [auth W]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
J [auth Z]	IPR004087	K Homology domain	Domain
J [auth Z]	IPR004044	K Homology domain, type 2	Domain
J [auth Z]	IPR015946	K homology domain-like, alpha/beta	Homologous Superfamily
J [auth Z]	IPR036419	Ribosomal protein S3, C-terminal domain superfamily	Homologous Superfamily
J [auth Z]	IPR027488	Small ribosomal subunit protein uS3, archaeal	Family
J [auth Z]	IPR001351	Small ribosomal subunit protein uS3, C-terminal	Domain
J [auth Z]	IPR005703	Small ribosomal subunit protein uS3, eukaryotic/archaeal	Family
J [auth Z]	IPR009019	K homology domain superfamily, prokaryotic type	Homologous Superfamily
K [auth D]	IPR018079	Small ribosomal subunit protein uS4, conserved site	Conserved Site
K [auth D]	IPR002942	RNA-binding S4 domain	Domain
K [auth D]	IPR001912	Small ribosomal subunit protein uS4, N-terminal	Domain
K [auth D]	IPR005710	Small ribosomal subunit protein uS4, eukaryotic/archaeal	Family
K [auth D]	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
K [auth D]	IPR022801	Small ribosomal subunit protein uS4	Family
K [auth D]	IPR022802	Small ribosomal subunit protein uS4, archaeal	Family
L [auth E]	IPR018199	Small ribosomal subunit protein eS4, N-terminal, conserved site	Conserved Site
L [auth E]	IPR013843	Small ribosomal subunit protein eS4, N-terminal	Domain
L [auth E]	IPR002942	RNA-binding S4 domain	Domain
L [auth E]	IPR013845	Small ribosomal subunit protein eS4, central region	Domain
L [auth E]	IPR000876	Small ribosomal subunit protein eS4	Family
L [auth E]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
L [auth E]	IPR038237	Small ribosomal subunit protein eS4, central domain superfamily	Homologous Superfamily
L [auth E]	IPR041982	Small ribosomal subunit protein eS4, KOW domain	Domain
L [auth E]	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
L [auth E]	IPR005824	KOW	Domain
M [auth F]	IPR000851	Small ribosomal subunit protein uS5	Family
M [auth F]	IPR005711	Small ribosomal subunit protein uS5, eukaryotic/archaeal	Family
M [auth F]	IPR005324	Small ribosomal subunit protein uS5, C-terminal	Domain
M [auth F]	IPR047866	Small ribosomal subunit protein uS5, archaea	Family
M [auth F]	IPR013810	Small ribosomal subunit protein uS5, N-terminal	Domain
M [auth F]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
M [auth F]	IPR018192	Small ribosomal subunit protein uS5, N-terminal, conserved site	Conserved Site
M [auth F]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
N [auth G]	IPR001377	Small ribosomal subunit protein eS6	Family
N [auth G]	IPR018282	Small ribosomal subunit protein eS6, conserved site	Conserved Site
N [auth G]	IPR020924	Small ribosomal subunit protein eS6, archaeal	Family
O [auth I]	IPR000630	Small ribosomal subunit protein uS8	Family
O [auth I]	IPR047863	Small ribosomal subunit protein uS8, conserved site	Conserved Site
O [auth I]	IPR035987	Small ribosomal subunit protein uS8 superfamily	Homologous Superfamily
P [auth J]	IPR001047	Small ribosomal subunit protein eS8	Family
P [auth J]	IPR020919	Small ribosomal subunit protein eS8, archaeal	Family
P [auth J]	IPR022309	Ribosomal protein eS8/ribosomal biogenesis NSA2	Family
P [auth J]	IPR018283	Small ribosomal subunit protein eS8, conserved site	Conserved Site
S [auth L]	IPR001848	Small ribosomal subunit protein uS10	Family
S [auth L]	IPR027486	Small ribosomal subunit protein uS10 domain	Domain
S [auth L]	IPR036838	Small ribosomal subunit protein uS10 domain superfamily	Homologous Superfamily
S [auth L]	IPR005729	Small ribosomal subunit protein uS10, eukaryotic/archaeal	Family
S [auth L]	IPR018268	Small ribosomal subunit protein uS10, conserved site	Conserved Site
T [auth O]	IPR019977	Small ribosomal subunit protein uS13, archaeal	Family
T [auth O]	IPR027437	Small ribosomal subunit protein uS13, C-terminal	Homologous Superfamily
T [auth O]	IPR001892	Small ribosomal subunit protein uS13	Family
T [auth O]	IPR018269	Small ribosomal subunit protein uS13, conserved site	Conserved Site
T [auth O]	IPR010979	Small ribosomal subunit protein uS13-like, H2TH	Homologous Superfamily
U [auth P]	IPR001209	Small ribosomal subunit protein uS14	Family
U [auth P]	IPR018271	Small ribosomal subunit protein uS14, conserved site	Conserved Site
U [auth P]	IPR039744	Small ribosomal subunit protein uS14, eukaryotes/archaea	Family
U [auth P]	IPR043140	Small ribosomal subunit protein uS14 superfamily	Homologous Superfamily
U [auth P]	IPR023676	Small ribosomal subunit protein uS14, archaea	Family
V [auth S]	IPR036401	Small ribosomal subunit protein eS17 superfamily	Homologous Superfamily
V [auth S]	IPR001210	Small ribosomal subunit protein eS17	Family
V [auth S]	IPR018273	Small ribosomal subunit protein eS17, conserved site	Conserved Site
W [auth T]	IPR002222	Small ribosomal subunit protein uS19	Family
W [auth T]	IPR023575	Small ribosomal subunit protein uS19, superfamily	Homologous Superfamily
W [auth T]	IPR020934	Small ribosomal subunit protein uS19, conserved site	Conserved Site
W [auth T]	IPR005713	Small ribosomal subunit protein uS19, eukaryotic/archaeal	Family
X [auth U]	IPR027548	Small ribosomal subunit protein eS19, archaeal	Family
X [auth U]	IPR001266	Small ribosomal subunit protein eS19	Family
X [auth U]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
X [auth U]	IPR018277	Small ribosomal subunit protein eS19, conserved site	Conserved Site
X [auth U]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
Y [auth X]	IPR028626	Ribosomal protein eS28 conserved site	Conserved Site
Y [auth X]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
Y [auth X]	IPR000289	Small ribosomal subunit protein eS28	Family
Z [auth Y]	IPR002906	Small ribosomal subunit protein eS31	Domain
Z [auth Y]	IPR022845	Small ribosomal subunit protein eS31, archaea	Family
Z [auth Y]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
AA [auth H]	IPR000235	Small ribosomal subunit protein uS7	Family
AA [auth H]	IPR036823	Small ribosomal subunit protein uS7 domain superfamily	Homologous Superfamily
AA [auth H]	IPR026018	Small ribosomal subunit protein uS7, archaeal	Family
AA [auth H]	IPR023798	Small ribosomal subunit protein uS7 domain	Domain
AA [auth H]	IPR005716	Ribosomal protein uS7, eukaryotic/archaeal	Family
FA [auth 1]	IPR001950	SUI1 domain	Domain
FA [auth 1]	IPR005872	Archaeal/bacterial translation initiation factor SUI1	Family
FA [auth 1]	IPR036877	SUI1 domain superfamily	Homologous Superfamily
FA [auth 1]	IPR022851	Translation factor SUI1 homolog, archaea	Family
GA [auth 6]	IPR018104	Translation initiation factor 1A (eIF-1A), conserved site	Conserved Site
GA [auth 6]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
GA [auth 6]	IPR006196	RNA-binding domain, S1, IF1 type	Domain
GA [auth 6]	IPR001253	Translation initiation factor 1A (eIF-1A)	Family
HA [auth 7]	IPR022424	Translation initiation factor 2, gamma subunit	Family
HA [auth 7]	IPR000795	Translational (tr)-type GTP-binding domain	Domain
HA [auth 7]	IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Homologous Superfamily
HA [auth 7]	IPR044128	Initiation factor eIF2 gamma, GTP-binding domain	Domain
HA [auth 7]	IPR015256	Initiation factor eIF2 gamma, C-terminal	Domain
HA [auth 7]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
HA [auth 7]	IPR005225	Small GTP-binding protein domain	Domain
HA [auth 7]	IPR044127	Initiation factor eIF2 gamma, domain 2	Domain
HA [auth 7]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
IA [auth 8]	IPR016190	Translation initiation factor IF2/IF5, zinc-binding	Homologous Superfamily
IA [auth 8]	IPR002735	Translation initiation factor IF2/IF5 domain	Domain
IA [auth 8]	IPR016189	Translation initiation factor IF2/IF5, N-terminal	Homologous Superfamily
IA [auth 8]	IPR004458	Translation initiation factor 2, beta subunit	Family
IA [auth 8]	IPR045196	Translation initiation factor IF2/IF5	Family
JA [auth 9]	IPR003029	S1 domain	Domain
JA [auth 9]	IPR044126	IF2a, S1-like domain	Domain
JA [auth 9]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
JA [auth 9]	IPR024055	Translation initiation factor 2, alpha subunit, C-terminal	Homologous Superfamily
JA [auth 9]	IPR024054	Translation initiation factor 2, alpha subunit, middle domain superfamily	Homologous Superfamily
JA [auth 9]	IPR011488	Translation initiation factor 2, alpha subunit	Family
JA [auth 9]	IPR022964	Translation initiation factor 2, alpha subunit, archaeal	Family
R [auth 3]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
R [auth 3]	IPR022481	Large ribosomal subunit protein eL8, archaea	Family
R [auth 3]	IPR004037	Large ribosomal subunit protein eL8-like, conserved site	Conserved Site
R [auth 3]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
R [auth 3]	IPR018492	Ribosomal protein eL8/Nhp2 family	Family
BA [auth K]	IPR020574	Small ribosomal subunit protein uS9, conserved site	Conserved Site
BA [auth K]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
BA [auth K]	IPR019958	Small ribosomal subunit protein uS9, archaeal	Family
BA [auth K]	IPR000754	Small ribosomal subunit protein uS9	Family
BA [auth K]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
G [auth B]	IPR005707	Small ribosomal subunit protein uS2, eukaryotic/archaeal	Family
G [auth B]	IPR023591	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	Homologous Superfamily
G [auth B]	IPR018130	Small ribosomal subunit protein uS2, conserved site	Conserved Site
G [auth B]	IPR001865	Small ribosomal subunit protein uS2	Family
G [auth B]	IPR023454	Small ribosomal subunit protein uS2, archaeal	Family