5ISY
Crystal structure of Nudix family protein with NAD
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Nudix | 8042152 | 3000098 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Nudix | 8036012 | 3000098 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | NADH pyrophosphatase intervening domain | 8042153 | 3001752 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | NADH pyrophosphatase intervening domain | 8042153 | 3001752 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Nudix | 8042152 | 3000098 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Nudix | 8036012 | 3000098 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e5isyA3 | A: a+b two layers | X: beta-Grasp | H: Nudix (From Topology) | T: Nudix | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF00293 | e5isyA1 | A: a+b two layers | X: beta-Grasp | H: Nudix (From Topology) | T: Nudix | F: PF00293 | ECOD (1.6) |
B [auth C] | F_UNCLASSIFIED | e5isyC3 | A: a+b two layers | X: beta-Grasp | H: Nudix (From Topology) | T: Nudix | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth C] | PF00293 | e5isyC1 | A: a+b two layers | X: beta-Grasp | H: Nudix (From Topology) | T: Nudix | F: PF00293 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.79.20 | Alpha Beta | Alpha-Beta Complex | Nucleoside Triphosphate Pyrophosphohydrolase | CATH (4.3.0) | |
A | 3.90.79.10 | Alpha Beta | Alpha-Beta Complex | Nucleoside Triphosphate Pyrophosphohydrolase | Nucleoside Triphosphate Pyrophosphohydrolase | CATH (4.3.0) |
B [auth C] | 3.90.79.20 | Alpha Beta | Alpha-Beta Complex | Nucleoside Triphosphate Pyrophosphohydrolase | CATH (4.3.0) | |
B [auth C] | 3.90.79.10 | Alpha Beta | Alpha-Beta Complex | Nucleoside Triphosphate Pyrophosphohydrolase | Nucleoside Triphosphate Pyrophosphohydrolase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C] | PF09297 | NADH pyrophosphatase zinc ribbon domain (zf-NADH-PPase) | NADH pyrophosphatase zinc ribbon domain | This domain is found in between two duplicated NUDIX domains. It has a zinc ribbon structure. | Domain |
A, B [auth C] | PF00293 | NUDIX domain (NUDIX) | NUDIX domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C] | IPR022925 | NAD-capped RNA hydrolase NudC | Family |
A, B [auth C] | IPR049734 | NADH pyrophosphatase-like, Nudix hydrolase C-terminal domain | Domain |
A, B [auth C] | IPR000086 | NUDIX hydrolase domain | Domain |
A, B [auth C] | IPR015376 | Zinc ribbon, NADH pyrophosphatase | Domain |
A, B [auth C] | IPR015797 | NUDIX hydrolase-like domain superfamily | Homologous Superfamily |
A, B [auth C] | IPR020084 | NUDIX hydrolase, conserved site | Conserved Site |