Crystal Structure of Beta-lactamase class D from Bacillus subtilis
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2 Family | beta-Lactamase/D-ala carboxypeptidase | 8074300 | 4002685 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | beta-lactamase/transpeptidase-like | 8074301 | 3001604 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | beta-lactamase/transpeptidase-like | 8074301 | 3001604 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | Transpeptidase_1st | e5e2fA1 | A: alpha complex topology | X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_1st | ECOD (1.6) |
A | Transpeptidase_2nd_1 | e5e2fA2 | A: a+b three layers | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_2nd_1 | ECOD (1.6) |
B | Transpeptidase_1st | e5e2fB2 | A: alpha complex topology | X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_1st | ECOD (1.6) |
B | Transpeptidase_2nd_1 | e5e2fB1 | A: a+b three layers | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_2nd_1 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| Beta-lactamase YbxI | | | - |
Protein Modification Annotation
Modified Residue(s) |
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Chain | Residue(s) | Description |
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| ALY | Parent Component: LYS
RESID:  AA0055
PSI-MOD :  N6-acetyl-L-lysine MOD:00064 |
| MSE | Parent Component: MET
RESID:  AA0055
|