Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF18662e5dgkA2 A: alpha arraysX: HTHH: HTHT: wingedF: PF18662ECOD (1.6)
APF06048e5dgkA3 A: a+b complex topologyX: Helicase Cch N-terminal domain (From Topology)H: Helicase Cch N-terminal domain (From Topology)T: Helicase Cch N-terminal domainF: PF06048ECOD (1.6)
APF06048e5dgkA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF06048ECOD (1.6)
BPF18662e5dgkB1 A: alpha arraysX: HTHH: HTHT: wingedF: PF18662ECOD (1.6)
BPF06048e5dgkB3 A: a+b complex topologyX: Helicase Cch N-terminal domain (From Topology)H: Helicase Cch N-terminal domain (From Topology)T: Helicase Cch N-terminal domainF: PF06048ECOD (1.6)
BPF06048e5dgkB2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF06048ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF18662Cch helix turn helix domain (HTH_56)Cch helix turn helix domainStaphylococcal Cassette Chromosome, or SCC elements, are a family of genomic islands found in S. aureus and closely related species. SCC elements that carry the mecA gene are called SCCmec and render S. aureus methicillin-resistant, creating the MRSA ...Staphylococcal Cassette Chromosome, or SCC elements, are a family of genomic islands found in S. aureus and closely related species. SCC elements that carry the mecA gene are called SCCmec and render S. aureus methicillin-resistant, creating the MRSA strains. Cch, the self-loading helicase encoded by SCCmec type IV, belongs to the pre-sensor II insert clade of AAA+ ATPases, as do the archaeal and eukaryotic MCM-family replicative helicases. The N-terminal domain carries Pfam:PF06048. The central domain (residues 157-438) contains an AAA+ ATPase fold. This domain is found at the C-terminal region, it is a winged helix-turn-helix (WH) domain typical of many dsDNA-binding proteins [1].
Domain
A, B
PF06048Domain of unknown function (DUF927) (DUF927)Domain of unknown function (DUF927)This entry represents a domain found in bacterial proteins of unknown function. The crystal structure has been solved for a protein containing this domain SWISS:Q0WXP6 [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Active helicase - -

InterPro: Protein Family Classification InterPro Database Homepage