Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth D]SCOP2B SuperfamilyBARA domain-like8090325 3002431 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF17649e5dfzA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: C2 domain (From Topology)T: C2 domainF: PF17649ECOD (1.6)
APF17649e5dfzA2 A: a+b duplicates or obligate multimersX: Vacuolar protein sorting-associated protein 30 BARA domain (From Topology)H: Vacuolar protein sorting-associated protein 30 BARA domain (From Topology)T: Vacuolar protein sorting-associated protein 30 BARA domainF: PF17649ECOD (1.6)
B [auth C]PF00792e5dfzC3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: C2 domain (From Topology)T: C2 domainF: PF00792ECOD (1.6)
B [auth C]PF00613e5dfzC2 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF00613ECOD (1.6)
B [auth C]PF00454e5dfzC1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00454ECOD (1.6)
C [auth B]F_UNCLASSIFIEDe5dfzB3 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: F_UNCLASSIFIEDECOD (1.6)
C [auth B]PF22956e5dfzB2 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF22956ECOD (1.6)
C [auth B]PF00069e5dfzB1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
D [auth E]PF07686e5dfzE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
E [auth D]PF17675e5dfzD2 A: alpha bundlesX: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)T: Helical domain in structural maintenance of chromosomes protein 3F: PF17675ECOD (1.6)
E [auth D]PF04111e5dfzD1 A: a+b duplicates or obligate multimersX: Vacuolar protein sorting-associated protein 30 BARA domain (From Topology)H: Vacuolar protein sorting-associated protein 30 BARA domain (From Topology)T: Vacuolar protein sorting-associated protein 30 BARA domainF: PF04111ECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
D [auth E]Heavy ChainIGHV1 -phosphatidylinositol 3-kinase vps34SAbDab (2024-05-03)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF17649Vacuolar protein sorting 38 (VPS38)Vacuolar protein sorting 38- Family
B [auth C]PF00613Phosphoinositide 3-kinase family, accessory domain (PIK domain) (PI3Ka)Phosphoinositide 3-kinase family, accessory domain (PIK domain)- Repeat
B [auth C]PF00792Phosphoinositide 3-kinase C2 (PI3K_C2)Phosphoinositide 3-kinase C2Phosphoinositide 3-kinase region postulated to contain a C2 domain. Outlier of Pfam:PF00168 family.Domain
B [auth C]PF00454Phosphatidylinositol 3- and 4-kinase (PI3_PI4_kinase)Phosphatidylinositol 3- and 4-kinase- Family
C [auth B]PF00069Protein kinase domain (Pkinase)Protein kinase domain- Domain
E [auth D]PF04111Apg6 BARA domain (APG6)Apg6 BARA domainIn yeast, 15 Apg proteins coordinate the formation of autophagosomes. Autophagy is a bulk degradation process induced by starvation in eukaryotic cells [1]. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the ...In yeast, 15 Apg proteins coordinate the formation of autophagosomes. Autophagy is a bulk degradation process induced by starvation in eukaryotic cells [1]. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the membrane or in a retrieval step of the carboxypeptidase Y sorting pathway [2]. This entry is the Beta-Alpha repeated, autophagy-specific (BARA) domain [3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Vacuolar protein sorting-associated protein 38
B [auth C]Phosphatidylinositol 3-kinase VPS34
C [auth B]Serine/threonine-protein kinase VPS15
D [auth E]Nanobody binding S. cerevisiae Vps34---
E [auth D]Vacuolar protein sorting-associated protein 30-
F [auth G]Putative N-terminal domain of S. cerevisiae Vps30---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR040939Vacuolar protein sorting 38Family
B [auth C]IPR015433Phosphatidylinositol kinaseFamily
B [auth C]IPR016024Armadillo-type foldHomologous Superfamily
B [auth C]IPR002420C2 phosphatidylinositol 3-kinase-type domainDomain
B [auth C]IPR018936Phosphatidylinositol 3/4-kinase, conserved siteConserved Site
B [auth C]IPR000403Phosphatidylinositol 3-/4-kinase, catalytic domainDomain
B [auth C]IPR001263Phosphoinositide 3-kinase, accessory (PIK) domainDomain
B [auth C]IPR042236Phosphoinositide 3-kinase, accessory (PIK) domain superfamilyHomologous Superfamily
B [auth C]IPR036940Phosphatidylinositol 3-/4-kinase, catalytic domain superfamilyHomologous Superfamily
B [auth C]IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
B [auth C]IPR035892C2 domain superfamilyHomologous Superfamily
B [auth C]IPR008290Phosphatidylinositol 3-kinase, Vps34 typeFamily
C [auth B]IPR016024Armadillo-type foldHomologous Superfamily
C [auth B]IPR021133HEAT, type 2Repeat
C [auth B]IPR011989Armadillo-like helicalHomologous Superfamily
C [auth B]IPR000719Protein kinase domainDomain
C [auth B]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
C [auth B]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
C [auth B]IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
C [auth B]IPR001680WD40 repeatRepeat
C [auth B]IPR045162Serine/threonine-protein kinase Vps15-likeFamily
C [auth B]IPR008271Serine/threonine-protein kinase, active siteActive Site
E [auth D]IPR007243Atg6/BeclinFamily
E [auth D]IPR041691Atg6/beclin, coiled-coil domainDomain
E [auth D]IPR038274Atg6/Beclin C-terminal domain superfamilyHomologous Superfamily
E [auth D]IPR040455Atg6, BARA domainDomain