5DEC
Crystal structure of the small alarmone synthetase 1 from Bacillus subtilis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5deca_ | Alpha and beta proteins (a+b) | Nucleotidyltransferase | Nucleotidyltransferase | RelA/SpoT domain | automated matches | (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], | SCOPe (2.08) |
B | d5decb_ | Alpha and beta proteins (a+b) | Nucleotidyltransferase | Nucleotidyltransferase | RelA/SpoT domain | automated matches | (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], | SCOPe (2.08) |
C | d5decc_ | Alpha and beta proteins (a+b) | Nucleotidyltransferase | Nucleotidyltransferase | RelA/SpoT domain | automated matches | (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], | SCOPe (2.08) |
D | d5decd_ | Alpha and beta proteins (a+b) | Nucleotidyltransferase | Nucleotidyltransferase | RelA/SpoT domain | automated matches | (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Nucleotidyltransferase-like | 8058788 | 3000129 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Nucleotidyltransferase-like | 8058788 | 3000129 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Nucleotidyltransferase-like | 8058788 | 3000129 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Nucleotidyltransferase-like | 8058788 | 3000129 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF04607 | e5decA1 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: PF04607 | ECOD (1.6) |
B | PF04607 | e5decB1 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: PF04607 | ECOD (1.6) |
C | PF04607 | e5decC1 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: PF04607 | ECOD (1.6) |
D | PF04607 | e5decD1 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: PF04607 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.460.10 | Alpha Beta | 2-Layer Sandwich | Beta Polymerase | domain 2 | CATH (4.3.0) |
A | 1.10.287.860 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Nucleotidyltransferase | CATH (4.3.0) |
B | 3.30.460.10 | Alpha Beta | 2-Layer Sandwich | Beta Polymerase | domain 2 | CATH (4.3.0) |
B | 1.10.287.860 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Nucleotidyltransferase | CATH (4.3.0) |
C | 3.30.460.10 | Alpha Beta | 2-Layer Sandwich | Beta Polymerase | domain 2 | CATH (4.3.0) |
C | 1.10.287.860 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Nucleotidyltransferase | CATH (4.3.0) |
D | 3.30.460.10 | Alpha Beta | 2-Layer Sandwich | Beta Polymerase | domain 2 | CATH (4.3.0) |
D | 1.10.287.860 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Nucleotidyltransferase | CATH (4.3.0) |