5D1V

Crystal Structure and Thermal Stability of Hemoglobin from Thermophilic Phototrophic Bacterium Chloroflexus aurantiacus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5d1va_	All alpha proteins	Globin-like	Globin-like	automated matches	automated matches	(Chloroflexus aurantiacus J-10-fl ) [TaxId: 324602 ],	SCOPe (2.08)
B	d5d1vb_	All alpha proteins	Globin-like	Globin-like	automated matches	automated matches	(Chloroflexus aurantiacus J-10-fl ) [TaxId: 324602 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Truncated hemoglobin	8064375	4000548	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Globin-like	8064376	3000554	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Globin-like	8064376	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Bac_globin	e5d1vA1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Bac_globin	ECOD (1.6)
B	Bac_globin	e5d1vB1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Bac_globin	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
B	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01152	Bacterial-like globin (Bac_globin)	Bacterial-like globin	This family of heme binding proteins are found mainly in bacteria. However they can also be found in some protozoa and plants as well.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Globin	oxygen binding binding small molecule binding oxygen carrier activity molecular carrier activity organic cyclic compound binding tetrapyrrole binding heme binding cation binding ion binding metal ion binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR019795	Globin, bacterial-like, conserved site	Conserved Site
A, B	IPR001486	Truncated hemoglobin	Family
A, B	IPR044203	Group 2 truncated hemoglobin GlbO/Two-on-two hemoglobin-3-like	Family
A, B	IPR009050	Globin-like superfamily	Homologous Superfamily
A, B	IPR012292	Globin/Protoglobin	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.