5CXP
X-ray crystallographic protein structure of the glycoside hydrolase family 30 subfamily 8 xylanase, Xyn30A, from Clostridium acetobutylicum
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e5cxpA2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF02055 | e5cxpA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF02055 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.3.0) |
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02055 | Glycosyl hydrolase family 30 TIM-barrel domain (Glyco_hydro_30) | Glycosyl hydrolase family 30 TIM-barrel domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Possible xylan degradation enzyme (Glycosyl hydrolase family 30-like domain and Ricin B-like domain) | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR035992 | Ricin B-like lectins | Homologous Superfamily | |
IPR001139 | Glycoside hydrolase family 30 | Family | |
IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
IPR033453 | Glycosyl hydrolase family 30, TIM-barrel domain | Domain | |
IPR000772 | Ricin B, lectin domain | Domain |