5CTR
Crystal structure of human SART3 HAT-C domain-human USP4 DUSP-UBL domain complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Suf | e5ctrA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: Suf | ECOD (1.6) |
B | Suf | e5ctrB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: Suf | ECOD (1.6) |
C | Ubiquitin_3 | e5ctrC2 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Ubiquitin_3 | ECOD (1.6) |
C | DUSP | e5ctrC1 | A: a+b complex topology | X: DUSP, domain in ubiquitin-specific proteases (From Topology) | H: DUSP, domain in ubiquitin-specific proteases (From Topology) | T: DUSP, domain in ubiquitin-specific proteases | F: DUSP | ECOD (1.6) |
D | Ubiquitin_3 | e5ctrD2 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Ubiquitin_3 | ECOD (1.6) |
D | DUSP | e5ctrD1 | A: a+b complex topology | X: DUSP, domain in ubiquitin-specific proteases (From Topology) | H: DUSP, domain in ubiquitin-specific proteases (From Topology) | T: DUSP, domain in ubiquitin-specific proteases | F: DUSP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 3.30.2230.10 | Alpha Beta | 2-Layer Sandwich | DUSP-like | DUSP-like | CATH (4.3.0) |
C | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
D | 3.30.2230.10 | Alpha Beta | 2-Layer Sandwich | DUSP-like | DUSP-like | CATH (4.3.0) |
D | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14836 | Ubiquitin-like domain (Ubiquitin_3) | Ubiquitin-like domain | This ubiquitin-like domain is found in several ubiquitin carboxyl-terminal hydrolases [1] and in gametogenetin-binding protein. | Domain | |
PF06337 | DUSP domain (DUSP) | DUSP domain | The DUSP (domain present in ubiquitin-specific protease) domain is found at the N-terminus of Ubiquitin-specific proteases. The structure of this domain has been solved [1]. Its tripod-like structure consists of a 3-fold alpha-helical bundle supporti ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
IPR008669 | LSM-interacting domain | Domain | |
IPR034218 | SART3, RNA recognition motif 2 | Domain | |
IPR034217 | SART3, RNA recognition motif 1 | Domain | |
IPR000504 | RNA recognition motif domain | Domain | |
IPR003107 | HAT (Half-A-TPR) repeat | Repeat | |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily | |
IPR035979 | RNA-binding domain superfamily | Homologous Superfamily | |
IPR028889 | Ubiquitin specific protease domain | Domain | |
IPR028135 | Ubiquitin-like domain, USP-type | Domain | |
IPR035927 | DUSP-like superfamily | Homologous Superfamily | |
IPR018200 | Ubiquitin specific protease, conserved site | Conserved Site | |
IPR006615 | Peptidase C19, ubiquitin-specific peptidase, DUSP domain | Domain | |
IPR001394 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | Domain | |
IPR038765 | Papain-like cysteine peptidase superfamily | Homologous Superfamily |