4Y9V

Gp54 tailspike of Acinetobacter baumannii bacteriophage AP22 in complex with A. baumannii capsular saccharide


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF20745e4y9vA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Ig-like domain in tailspike protein (From Topology)T: Ig-like domain in tailspike proteinF: PF20745ECOD (1.6)
APF22442e4y9vA3 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pectin lyase-like (From Topology)T: Pectin lyase-likeF: PF22442ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF20745Ig-like domain in tailspike protein (TSP_Ig-like)Ig-like domain in tailspike proteinThis domain is found in Tail spike protein (TSP) from Shigella phage Sf6 and similar sequences from tailed bacteriophages and bacterial prophages. It forms a beta-sandwich formed by two antiparallel, three stranded beta-sheets. A short alpha helix is ...This domain is found in Tail spike protein (TSP) from Shigella phage Sf6 and similar sequences from tailed bacteriophages and bacterial prophages. It forms a beta-sandwich formed by two antiparallel, three stranded beta-sheets. A short alpha helix is included in the connecting loop between the third and fourth strand. This domain is structurally homologous to viral coat proteins [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage