4V8C

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth AD]SCOP2B SuperfamilyNucleic acid-binding proteins8033195 3000135 SCOP2B (2022-06-29)
C [auth AD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033194 3000334 SCOP2B (2022-06-29)
GA [auth BD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033194 3000334 SCOP2B (2022-06-29)
GA [auth BD]SCOP2B SuperfamilyNucleic acid-binding proteins8033195 3000135 SCOP2B (2022-06-29)
D [auth AE]SCOP2B SuperfamilyTranslational proteins8033197 3000811 SCOP2B (2022-06-29)
HA [auth BE]SCOP2B SuperfamilyTranslational proteins8033197 3000811 SCOP2B (2022-06-29)
E [auth AF]SCOP2B SuperfamilyRibosomal protein L48033198 3001146 SCOP2B (2022-06-29)
IA [auth BF]SCOP2B SuperfamilyRibosomal protein L48033198 3001146 SCOP2B (2022-06-29)
J [auth AN]SCOP2B Superfamily50S Ribosomal protein L14-like8042936 3000433 SCOP2B (2022-06-29)
NA [auth BN]SCOP2B Superfamily50S Ribosomal protein L14-like8042936 3000433 SCOP2B (2022-06-29)
K [auth AO]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8033207 3001045 SCOP2B (2022-06-29)
OA [auth BO]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8033207 3001045 SCOP2B (2022-06-29)
L [auth AP]SCOP2B SuperfamilyRibosomal protein L16p/L10e8043627 3000884 SCOP2B (2022-06-29)
PA [auth BP]SCOP2B SuperfamilyRibosomal protein L16p/L10e8043627 3000884 SCOP2B (2022-06-29)
M [auth A0]SCOP2B SuperfamilyProkaryotic ribosomal protein L178032744 3000995 SCOP2B (2022-06-29)
QA [auth B0]SCOP2B SuperfamilyProkaryotic ribosomal protein L178032744 3000995 SCOP2B (2022-06-29)
N [auth AQ]SCOP2B SuperfamilyTranslational machinery components8033211 3000571 SCOP2B (2022-06-29)
RA [auth BQ]SCOP2B SuperfamilyTranslational machinery components8033211 3000571 SCOP2B (2022-06-29)
O [auth AR]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033214 3000334 SCOP2B (2022-06-29)
SA [auth BR]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033214 3000334 SCOP2B (2022-06-29)
P [auth A1]SCOP2B SuperfamilyRibosomal protein L208033216 3000563 SCOP2B (2022-06-29)
TA [auth B1]SCOP2B SuperfamilyRibosomal protein L208033216 3000563 SCOP2B (2022-06-29)
VA [auth BS]SCOP2B SuperfamilyRibosomal protein L228033220 3001078 SCOP2B (2022-06-29)
R [auth AS]SCOP2B SuperfamilyRibosomal protein L228033220 3001078 SCOP2B (2022-06-29)
S [auth AT]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8033219 3000210 SCOP2B (2022-06-29)
WA [auth BT]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8033219 3000210 SCOP2B (2022-06-29)
T [auth AU]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033223 3000334 SCOP2B (2022-06-29)
XA [auth BU]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033223 3000334 SCOP2B (2022-06-29)
V [auth A3]SCOP2B SuperfamilyRibosomal L27 protein-like8041210 3000539 SCOP2B (2022-06-29)
ZA [auth B3]SCOP2B SuperfamilyRibosomal L27 protein-like8041210 3000539 SCOP2B (2022-06-29)
AB [auth BZ]SCOP2B SuperfamilyL28p-like8042932 3001966 SCOP2B (2022-06-29)
W [auth AZ]SCOP2B SuperfamilyL28p-like8042932 3001966 SCOP2B (2022-06-29)
BB [auth BW]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8042933 3000713 SCOP2B (2022-06-29)
X [auth AW]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8042933 3000713 SCOP2B (2022-06-29)
DB [auth B4]SCOP2B SuperfamilyL28p-like8033189 3001966 SCOP2B (2022-06-29)
Z [auth A4]SCOP2B SuperfamilyL28p-like8033189 3001966 SCOP2B (2022-06-29)
AA [auth A5]SCOP2B SuperfamilyZn-binding ribosomal proteins8033190 3001320 SCOP2B (2022-06-29)
EB [auth B5]SCOP2B SuperfamilyZn-binding ribosomal proteins8033190 3001320 SCOP2B (2022-06-29)
BA [auth A6]SCOP2B SuperfamilyZn-binding ribosomal proteins8033191 3001320 SCOP2B (2022-06-29)
FB [auth B6]SCOP2B SuperfamilyZn-binding ribosomal proteins8033191 3001320 SCOP2B (2022-06-29)
DA [auth A8]SCOP2B SuperfamilyL35p-like8033192 3000790 SCOP2B (2022-06-29)
HB [auth B8]SCOP2B SuperfamilyL35p-like8033192 3000790 SCOP2B (2022-06-29)
IC [auth DE]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8044010 3001397 SCOP2B (2022-06-29)
JB [auth CE]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8044010 3001397 SCOP2B (2022-06-29)
JC [auth DF]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain8044012 3001053 SCOP2B (2022-06-29)
JC [auth DF]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II)8044011 3001043 SCOP2B (2022-06-29)
KB [auth CF]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II)8044011 3001043 SCOP2B (2022-06-29)
KB [auth CF]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain8044012 3001053 SCOP2B (2022-06-29)
LC [auth DH]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8044015 3000100 SCOP2B (2022-06-29)
LC [auth DH]SCOP2B SuperfamilydsRNA-binding domain-like8044017 3000985 SCOP2B (2022-06-29)
MB [auth CH]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8044015 3000100 SCOP2B (2022-06-29)
MB [auth CH]SCOP2B SuperfamilydsRNA-binding domain-like8044017 3000985 SCOP2B (2022-06-29)
PC [auth DL]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8037678 3000100 SCOP2B (2022-06-29)
QB [auth CL]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8037678 3000100 SCOP2B (2022-06-29)
QC [auth DM]SCOP2B SuperfamilyRibosomal protein S108044019 3001336 SCOP2B (2022-06-29)
RB [auth CM]SCOP2B SuperfamilyRibosomal protein S108044019 3001336 SCOP2B (2022-06-29)
SB [auth CN]SCOP2B SuperfamilyTranslational machinery components8044020 3000571 SCOP2B (2022-06-29)
RC [auth DN]SCOP2B SuperfamilyTranslational machinery components8044020 3000571 SCOP2B (2022-06-29)
SC [auth DO]SCOP2B SuperfamilyNucleic acid-binding proteins8044021 3000135 SCOP2B (2022-06-29)
TB [auth CO]SCOP2B SuperfamilyNucleic acid-binding proteins8044021 3000135 SCOP2B (2022-06-29)
TC [auth DP]SCOP2B SuperfamilyS13-like H2TH domain8003708 3000053 SCOP2B (2022-06-29)
UB [auth CP]SCOP2B SuperfamilyS13-like H2TH domain8003708 3000053 SCOP2B (2022-06-29)
WC [auth DS]SCOP2B SuperfamilyRibosomal protein S168044025 3000680 SCOP2B (2022-06-29)
XB [auth CS]SCOP2B SuperfamilyRibosomal protein S168044025 3000680 SCOP2B (2022-06-29)
YC [auth DU]SCOP2B SuperfamilyRibosomal protein S188044028 3001191 SCOP2B (2022-06-29)
ZB [auth CU]SCOP2B SuperfamilyRibosomal protein S188044028 3001191 SCOP2B (2022-06-29)
AC [auth CV]SCOP2B SuperfamilyRibosomal protein S198044027 3000686 SCOP2B (2022-06-29)
ZC [auth DV]SCOP2B SuperfamilyRibosomal protein S198044027 3000686 SCOP2B (2022-06-29)
AD [auth DW]SCOP2B SuperfamilyRibosomal protein S208044029 3001362 SCOP2B (2022-06-29)
BC [auth CW]SCOP2B SuperfamilyRibosomal protein S208044029 3001362 SCOP2B (2022-06-29)
Q [auth A2]SCOP2B Superfamilyl21p-like8033218 3002005 SCOP2B (2022-06-29)
UA [auth B2]SCOP2B Superfamilyl21p-like8033218 3002005 SCOP2B (2022-06-29)
KC [auth DG]SCOP2B SuperfamilyAlpha-L RNA-binding motif8044014 3001473 SCOP2B (2022-06-29)
LB [auth CG]SCOP2B SuperfamilyAlpha-L RNA-binding motif8044014 3001473 SCOP2B (2022-06-29)
OB [auth CJ]SCOP2B SuperfamilyRibosomal protein S78033523 3000799 SCOP2B (2022-06-29)
NC [auth DJ]SCOP2B SuperfamilyRibosomal protein S78033523 3000799 SCOP2B (2022-06-29)
H [auth AK]SCOP2B SuperfamilyL9 N-domain-like8042935 3000338 SCOP2B (2022-06-29)
H [auth AK]SCOP2B SuperfamilyRibosomal protein L9 C-domain8042934 3000329 SCOP2B (2022-06-29)
LA [auth BK]SCOP2B SuperfamilyL9 N-domain-like8042935 3000338 SCOP2B (2022-06-29)
LA [auth BK]SCOP2B SuperfamilyRibosomal protein L9 C-domain8042934 3000329 SCOP2B (2022-06-29)
MA [auth BM]SCOP2B SuperfamilyRibosomal protein L138033205 3001134 SCOP2B (2022-06-29)
I [auth AM]SCOP2B SuperfamilyRibosomal protein L138033205 3001134 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth AD]PF00181e4v8cAD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
C [auth AD]PF03947e4v8cAD1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
GA [auth BD]PF00181e4v8cBD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
GA [auth BD]PF03947e4v8cBD1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
D [auth AE]PF00297e4v8cAE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
HA [auth BE]PF00297e4v8cBE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
E [auth AF]PF00573e4v8cAF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
IA [auth BF]PF00573e4v8cBF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
F [auth AG]PF00281,PF00673e4v8cAG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
JA [auth BG]PF00281,PF00673e4v8cBG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
G [auth AH]PF00347e4v8cAH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
KA [auth BH]PF00347e4v8cBH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
J [auth AN]PF00238e4v8cAN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
NA [auth BN]PF00238e4v8cBN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
K [auth AO]PF00828e4v8cAO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
OA [auth BO]PF00828e4v8cBO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
L [auth AP]PF00252e4v8cAP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
PA [auth BP]PF00252e4v8cBP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
M [auth A0]PF01196e4v8cA01 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
QA [auth B0]PF01196e4v8cB01 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
N [auth AQ]PF00861e4v8cAQ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
RA [auth BQ]PF00861e4v8cBQ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
O [auth AR]PF01245e4v8cAR1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
SA [auth BR]PF01245e4v8cBR1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
P [auth A1]PF00453e4v8cA11 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
TA [auth B1]PF00453e4v8cB11 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
VA [auth BS]PF00237e4v8cBS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
R [auth AS]PF00237e4v8cAS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
S [auth AT]PF00276e4v8cAT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
WA [auth BT]PF00276e4v8cBT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
T [auth AU]PF00467,PF17136e4v8cAU1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
XA [auth BU]PF00467,PF17136e4v8cBU1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
U [auth AV]PF01386e4v8cAV2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
U [auth AV]PF14693e4v8cAV1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: PF14693ECOD (1.6)
YA [auth BV]PF01386e4v8cBV2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
YA [auth BV]PF14693e4v8cBV1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: PF14693ECOD (1.6)
V [auth A3]PF01016e4v8cA31 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
ZA [auth B3]PF01016e4v8cB31 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
AB [auth BZ]PF00830e4v8cBZ1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
W [auth AZ]PF00830e4v8cAZ1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
BB [auth BW]PF00831e4v8cBW1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
X [auth AW]PF00831e4v8cAW1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
Y [auth AX]PF00327e4v8cAX1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
CB [auth BX]PF00327e4v8cBX1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
DB [auth B4]PF01197e4v8cB41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF01197ECOD (1.6)
Z [auth A4]PF01197e4v8cA41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF01197ECOD (1.6)
AA [auth A5]PF01783e4v8cA51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
EB [auth B5]PF01783e4v8cB51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
BA [auth A6]PF00471e4v8cA61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
FB [auth B6]PF00471e4v8cB61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
CA [auth A7]PF00468e4v8cA71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
GB [auth B7]PF00468e4v8cB71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
DA [auth A8]PF01632e4v8cA81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
HB [auth B8]PF01632e4v8cB81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
IC [auth DE]PF00318e4v8cDE1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
JB [auth CE]PF00318e4v8cCE1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
JC [auth DF]PF00189e4v8cDF1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
JC [auth DF]PF07650e4v8cDF2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
KB [auth CF]PF00189e4v8cCF2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
KB [auth CF]PF07650e4v8cCF1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
LC [auth DH]PF03719e4v8cDH2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
LC [auth DH]PF00333e4v8cDH1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
MB [auth CH]PF03719e4v8cCH2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
MB [auth CH]PF00333e4v8cCH1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
MC [auth DI]PF01250e4v8cDI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
NB [auth CI]PF01250e4v8cCI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
OC [auth DK]PF00410e4v8cDK1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
OC [auth DK]PF00410e4v8cDK2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
PB [auth CK]PF00410e4v8cCK1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
PB [auth CK]PF00410e4v8cCK2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
PC [auth DL]PF00380e4v8cDL1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
QB [auth CL]PF00380e4v8cCL1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
QC [auth DM]PF00338e4v8cDM1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
RB [auth CM]PF00338e4v8cCM1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
SB [auth CN]PF00411e4v8cCN1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
RC [auth DN]PF00411e4v8cDN1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
SC [auth DO]PF00164e4v8cDO1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
TB [auth CO]PF00164e4v8cCO1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
TC [auth DP]PF00416e4v8cDP1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
UB [auth CP]PF00416e4v8cCP1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
UC [auth DQ]PF00253e4v8cDQ1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
VB [auth CQ]PF00253e4v8cCQ1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
VC [auth DR]PF00312e4v8cDR1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
WB [auth CR]PF00312e4v8cCR1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
WC [auth DS]PF00886e4v8cDS1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
XB [auth CS]PF00886e4v8cCS1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
YB [auth CT]PF00366e4v8cCT1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
XC [auth DT]PF00366e4v8cDT1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
YC [auth DU]PF01084e4v8cDU1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
ZB [auth CU]PF01084e4v8cCU1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
AC [auth CV]PF00203e4v8cCV1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
ZC [auth DV]PF00203e4v8cDV1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
AD [auth DW]PF01649e4v8cDW1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
BC [auth CW]PF01649e4v8cCW1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
Q [auth A2]PF00829e4v8cA21 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
UA [auth B2]PF00829e4v8cB21 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
KC [auth DG]PF00163,PF01479e4v8cDG1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
LB [auth CG]PF00163,PF01479e4v8cCG1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
OB [auth CJ]PF00177e4v8cCJ1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
NC [auth DJ]PF00177e4v8cDJ1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
H [auth AK]PF01281e4v8cAK1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
H [auth AK]PF03948e4v8cAK2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: PF03948ECOD (1.6)
LA [auth BK]PF01281e4v8cBK1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
LA [auth BK]PF03948e4v8cBK2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: PF03948ECOD (1.6)
MA [auth BM]PF00572e4v8cBM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
I [auth AM]PF00572e4v8cAM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth AD],
GA [auth BD]
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
C [auth AD],
GA [auth BD]
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
D [auth AE],
HA [auth BE]
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
E [auth AF],
IA [auth BF]
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth AG],
JA [auth BG]
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
F [auth AG],
JA [auth BG]
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
J [auth AN],
NA [auth BN]
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
K [auth AO],
OA [auth BO]
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
L [auth AP],
PA [auth BP]
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
M [auth A0],
QA [auth B0]
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
N [auth AQ],
RA [auth BQ]
PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
O [auth AR],
SA [auth BR]
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
P [auth A1],
TA [auth B1]
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
R [auth AS],
VA [auth BS]
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
S [auth AT],
WA [auth BT]
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
T [auth AU],
XA [auth BU]
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
T [auth AU],
XA [auth BU]
PF00467KOW motif (KOW)KOW motif- Family
U [auth AV],
YA [auth BV]
PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
U [auth AV],
YA [auth BV]
PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
V [auth A3],
ZA [auth B3]
PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
AB [auth BZ],
W [auth AZ]
PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
BB [auth BW],
X [auth AW]
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
CB [auth BX],
Y [auth AX]
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
DB [auth B4],
Z [auth A4]
PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
AA [auth A5],
EB [auth B5]
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
BA [auth A6],
FB [auth B6]
PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
CA [auth A7],
GB [auth B7]
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
DA [auth A8],
HB [auth B8]
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
IC [auth DE],
JB [auth CE]
PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
JC [auth DF],
KB [auth CF]
PF07650KH domain (KH_2)KH domain- Domain
JC [auth DF],
KB [auth CF]
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
LC [auth DH],
MB [auth CH]
PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
LC [auth DH],
MB [auth CH]
PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
MC [auth DI],
NB [auth CI]
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
PC [auth DL],
QB [auth CL]
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
QC [auth DM],
RB [auth CM]
PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
RC [auth DN],
SB [auth CN]
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
SC [auth DO],
TB [auth CO]
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
TC [auth DP],
UB [auth CP]
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
VC [auth DR],
WB [auth CR]
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
WC [auth DS],
XB [auth CS]
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
YC [auth DU],
ZB [auth CU]
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
AC [auth CV],
ZC [auth DV]
PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
AD [auth DW],
BC [auth CW]
PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
BD [auth DX],
CC [auth CX]
PF1707030S ribosomal protein Thx (Thx)30S ribosomal protein Thx- Family
Q [auth A2],
UA [auth B2]
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
KC [auth DG],
LB [auth CG]
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
KC [auth DG],
LB [auth CG]
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
NC [auth DJ],
OB [auth CJ]
PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
H [auth AK],
LA [auth BK]
PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
H [auth AK],
LA [auth BK]
PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
I [auth AM],
MA [auth BM]
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AA],
EA [auth BA]
RNA (2912-MER)---
B [auth AB],
FA [auth BB]
5S RIBOSOMAL RNA---
C [auth AD],
GA [auth BD]
50S ribosomal protein L2
D [auth AE],
HA [auth BE]
50S ribosomal protein L3
E [auth AF],
IA [auth BF]
50S ribosomal protein L4
F [auth AG],
JA [auth BG]
50S ribosomal protein L5
G [auth AH],
KA [auth BH]
50S ribosomal protein L6---
J [auth AN],
NA [auth BN]
50S ribosomal protein L14
K [auth AO],
OA [auth BO]
50S ribosomal protein L15
L [auth AP],
PA [auth BP]
50S ribosomal protein L16
M [auth A0],
QA [auth B0]
50S ribosomal protein L17
N [auth AQ],
RA [auth BQ]
50S ribosomal protein L18
O [auth AR],
SA [auth BR]
50S ribosomal protein L19
P [auth A1],
TA [auth B1]
50S ribosomal protein L20
R [auth AS],
VA [auth BS]
50S ribosomal protein L22
S [auth AT],
WA [auth BT]
50S ribosomal protein L23
T [auth AU],
XA [auth BU]
50S ribosomal protein L24
U [auth AV],
YA [auth BV]
50S ribosomal protein L25
V [auth A3],
ZA [auth B3]
50S ribosomal protein L27
AB [auth BZ],
W [auth AZ]
50S ribosomal protein L28
BB [auth BW],
X [auth AW]
50S ribosomal protein L29
CB [auth BX],
Y [auth AX]
50S ribosomal protein L30
DB [auth B4],
Z [auth A4]
50S ribosomal protein L31
AA [auth A5],
EB [auth B5]
50S ribosomal protein L32
BA [auth A6],
FB [auth B6]
50S ribosomal protein L33
CA [auth A7],
GB [auth B7]
50S ribosomal protein L34
DA [auth A8],
HB [auth B8]
50S ribosomal protein L35
IC [auth DE],
JB [auth CE]
30S RIBOSOMAL PROTEIN S2
JC [auth DF],
KB [auth CF]
30S RIBOSOMAL PROTEIN S3
LC [auth DH],
MB [auth CH]
30S RIBOSOMAL PROTEIN S5
MC [auth DI],
NB [auth CI]
30S RIBOSOMAL PROTEIN S6
OC [auth DK],
PB [auth CK]
30S RIBOSOMAL PROTEIN S8---
PC [auth DL],
QB [auth CL]
30S RIBOSOMAL PROTEIN S9
QC [auth DM],
RB [auth CM]
30S RIBOSOMAL PROTEIN S10
RC [auth DN],
SB [auth CN]
30S RIBOSOMAL PROTEIN S11
SC [auth DO],
TB [auth CO]
30S RIBOSOMAL PROTEIN S12
TC [auth DP],
UB [auth CP]
30S RIBOSOMAL PROTEIN S13
UC [auth DQ],
VB [auth CQ]
30S RIBOSOMAL PROTEIN S14---
VC [auth DR],
WB [auth CR]
30S RIBOSOMAL PROTEIN S15
WC [auth DS],
XB [auth CS]
30S RIBOSOMAL PROTEIN S16
XC [auth DT],
YB [auth CT]
30S RIBOSOMAL PROTEIN S17---
YC [auth DU],
ZB [auth CU]
30S RIBOSOMAL PROTEIN S18
AC [auth CV],
ZC [auth DV]
30S RIBOSOMAL PROTEIN S19
AD [auth DW],
BC [auth CW]
30S RIBOSOMAL PROTEIN S20
BD [auth DX],
CC [auth CX]
30S RIBOSOMAL PROTEIN THX -
CD [auth DB],
DC [auth CB]
TRNA-LEU---
DD [auth DC],
EC [auth CC],
ED [auth DD],
FC [auth CD]
TRNA-FMET---
FD [auth D1],
GC [auth C1]
MRNA---
Q [auth A2],
UA [auth B2]
50S ribosomal protein L21
HC [auth DA],
IB [auth CA]
16S ribosomal RNA---
KC [auth DG],
LB [auth CG]
30S RIBOSOMAL PROTEIN S4
NC [auth DJ],
OB [auth CJ]
30S RIBOSOMAL PROTEIN S7
H [auth AK],
LA [auth BK]
50S ribosomal protein L9
I [auth AM],
MA [auth BM]
50S ribosomal protein L13

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth AD],
GA [auth BD]
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth AD],
GA [auth BD]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth AD],
GA [auth BD]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth AD],
GA [auth BD]
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth AD],
GA [auth BD]
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
C [auth AD],
GA [auth BD]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth AD],
GA [auth BD]
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth AD],
GA [auth BD]
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth AD],
GA [auth BD]
IPR002171Large ribosomal subunit protein uL2Family
D [auth AE],
HA [auth BE]
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth AE],
HA [auth BE]
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth AE],
HA [auth BE]
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth AE],
HA [auth BE]
IPR000597Large ribosomal subunit protein uL3Family
E [auth AF],
IA [auth BF]
IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth AF],
IA [auth BF]
IPR002136Large ribosomal subunit protein uL4Family
E [auth AF],
IA [auth BF]
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth AG],
JA [auth BG]
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
F [auth AG],
JA [auth BG]
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth AG],
JA [auth BG]
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
F [auth AG],
JA [auth BG]
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
F [auth AG],
JA [auth BG]
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
F [auth AG],
JA [auth BG]
IPR002132Large ribosomal subunit protein uL5Family
J [auth AN],
NA [auth BN]
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
J [auth AN],
NA [auth BN]
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
J [auth AN],
NA [auth BN]
IPR000218Large ribosomal subunit protein uL14Family
J [auth AN],
NA [auth BN]
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
K [auth AO],
OA [auth BO]
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
K [auth AO],
OA [auth BO]
IPR021131Large ribosomal subunit protein uL15/eL18Domain
K [auth AO],
OA [auth BO]
IPR030878Large ribosomal subunit protein uL15Family
K [auth AO],
OA [auth BO]
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
K [auth AO],
OA [auth BO]
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
L [auth AP],
PA [auth BP]
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth AP],
PA [auth BP]
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
L [auth AP],
PA [auth BP]
IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth AP],
PA [auth BP]
IPR047873Large ribosomal subunit protein uL16Family
M [auth A0],
QA [auth B0]
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
M [auth A0],
QA [auth B0]
IPR000456Large ribosomal subunit protein bL17Family
N [auth AQ],
RA [auth BQ]
IPR005484Large ribosomal subunit protein uL18Family
N [auth AQ],
RA [auth BQ]
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
O [auth AR],
SA [auth BR]
IPR001857Large ribosomal subunit protein bL19Family
O [auth AR],
SA [auth BR]
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
O [auth AR],
SA [auth BR]
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
O [auth AR],
SA [auth BR]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth A1],
TA [auth B1]
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
P [auth A1],
TA [auth B1]
IPR005813Large ribosomal subunit protein bL20Family
R [auth AS],
VA [auth BS]
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
R [auth AS],
VA [auth BS]
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth AS],
VA [auth BS]
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth AS],
VA [auth BS]
IPR001063Large ribosomal subunit protein uL22Family
R [auth AS],
VA [auth BS]
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
S [auth AT],
WA [auth BT]
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
S [auth AT],
WA [auth BT]
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
S [auth AT],
WA [auth BT]
IPR013025Large ribosomal subunit protein uL23-likeFamily
T [auth AU],
XA [auth BU]
IPR003256Large ribosomal subunit protein uL24Family
T [auth AU],
XA [auth BU]
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
T [auth AU],
XA [auth BU]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
T [auth AU],
XA [auth BU]
IPR005824KOWDomain
T [auth AU],
XA [auth BU]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth AU],
XA [auth BU]
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
U [auth AV],
YA [auth BV]
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
U [auth AV],
YA [auth BV]
IPR001021Ribosomal protein bL25, long-formFamily
U [auth AV],
YA [auth BV]
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
U [auth AV],
YA [auth BV]
IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
U [auth AV],
YA [auth BV]
IPR020057Large ribosomal subunit protein bL25, beta domainDomain
U [auth AV],
YA [auth BV]
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
V [auth A3],
ZA [auth B3]
IPR001684Large ribosomal subunit protein bL27Family
V [auth A3],
ZA [auth B3]
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
AB [auth BZ],
W [auth AZ]
IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
AB [auth BZ],
W [auth AZ]
IPR026569Large ribosomal subunit protein bL28Family
AB [auth BZ],
W [auth AZ]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
BB [auth BW],
X [auth AW]
IPR001854Large ribosomal subunit protein uL29Family
BB [auth BW],
X [auth AW]
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
BB [auth BW],
X [auth AW]
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
CB [auth BX],
Y [auth AX]
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
CB [auth BX],
Y [auth AX]
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
CB [auth BX],
Y [auth AX]
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
CB [auth BX],
Y [auth AX]
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
DB [auth B4],
Z [auth A4]
IPR002150Large ribosomal subunit protein bL31 type A/BFamily
DB [auth B4],
Z [auth A4]
IPR027491Large ribosomal subunit protein bL31 type AFamily
DB [auth B4],
Z [auth A4]
IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
DB [auth B4],
Z [auth A4]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AA [auth A5],
EB [auth B5]
IPR002677Large ribosomal subunit protein bL32Family
AA [auth A5],
EB [auth B5]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth A5],
EB [auth B5]
IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
BA [auth A6],
FB [auth B6]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth A6],
FB [auth B6]
IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth A6],
FB [auth B6]
IPR001705Large ribosomal subunit protein bL33Family
BA [auth A6],
FB [auth B6]
IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
CA [auth A7],
GB [auth B7]
IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CA [auth A7],
GB [auth B7]
IPR000271Large ribosomal subunit protein bL34Family
DA [auth A8],
HB [auth B8]
IPR021137Large ribosomal subunit protein bL35-likeFamily
DA [auth A8],
HB [auth B8]
IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
DA [auth A8],
HB [auth B8]
IPR001706Large ribosomal subunit protein bL35Family
DA [auth A8],
HB [auth B8]
IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
IC [auth DE],
JB [auth CE]
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
IC [auth DE],
JB [auth CE]
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
IC [auth DE],
JB [auth CE]
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
IC [auth DE],
JB [auth CE]
IPR001865Small ribosomal subunit protein uS2Family
JC [auth DF],
KB [auth CF]
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
JC [auth DF],
KB [auth CF]
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
JC [auth DF],
KB [auth CF]
IPR004087K Homology domainDomain
JC [auth DF],
KB [auth CF]
IPR004044K Homology domain, type 2Domain
JC [auth DF],
KB [auth CF]
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
JC [auth DF],
KB [auth CF]
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
JC [auth DF],
KB [auth CF]
IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
JC [auth DF],
KB [auth CF]
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
LC [auth DH],
MB [auth CH]
IPR000851Small ribosomal subunit protein uS5Family
LC [auth DH],
MB [auth CH]
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
LC [auth DH],
MB [auth CH]
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
LC [auth DH],
MB [auth CH]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
LC [auth DH],
MB [auth CH]
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
LC [auth DH],
MB [auth CH]
IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
LC [auth DH],
MB [auth CH]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
MC [auth DI],
NB [auth CI]
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
MC [auth DI],
NB [auth CI]
IPR000529Small ribosomal subunit protein bS6Family
MC [auth DI],
NB [auth CI]
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
MC [auth DI],
NB [auth CI]
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
MC [auth DI],
NB [auth CI]
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
PC [auth DL],
QB [auth CL]
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
PC [auth DL],
QB [auth CL]
IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
PC [auth DL],
QB [auth CL]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
PC [auth DL],
QB [auth CL]
IPR000754Small ribosomal subunit protein uS9Family
PC [auth DL],
QB [auth CL]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
QC [auth DM],
RB [auth CM]
IPR001848Small ribosomal subunit protein uS10Family
QC [auth DM],
RB [auth CM]
IPR027486Small ribosomal subunit protein uS10 domainDomain
QC [auth DM],
RB [auth CM]
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
QC [auth DM],
RB [auth CM]
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
RC [auth DN],
SB [auth CN]
IPR001971Small ribosomal subunit protein uS11Family
RC [auth DN],
SB [auth CN]
IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
RC [auth DN],
SB [auth CN]
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
RC [auth DN],
SB [auth CN]
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
SC [auth DO],
TB [auth CO]
IPR006032Small ribosomal subunit protein uS12Family
SC [auth DO],
TB [auth CO]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SC [auth DO],
TB [auth CO]
IPR005679Ribosomal protein uS12, bacterial-typeFamily
TC [auth DP],
UB [auth CP]
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
TC [auth DP],
UB [auth CP]
IPR001892Small ribosomal subunit protein uS13Family
TC [auth DP],
UB [auth CP]
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
TC [auth DP],
UB [auth CP]
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
TC [auth DP],
UB [auth CP]
IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
VC [auth DR],
WB [auth CR]
IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
VC [auth DR],
WB [auth CR]
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
VC [auth DR],
WB [auth CR]
IPR000589Small ribosomal subunit protein uS15Family
WC [auth DS],
XB [auth CS]
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
WC [auth DS],
XB [auth CS]
IPR000307Small ribosomal subunit protein bS16Family
YC [auth DU],
ZB [auth CU]
IPR001648Small ribosomal subunit protein bS18Family
YC [auth DU],
ZB [auth CU]
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
YC [auth DU],
ZB [auth CU]
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
AC [auth CV],
ZC [auth DV]
IPR002222Small ribosomal subunit protein uS19Family
AC [auth CV],
ZC [auth DV]
IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
AC [auth CV],
ZC [auth DV]
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AC [auth CV],
ZC [auth DV]
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
AD [auth DW],
BC [auth CW]
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
AD [auth DW],
BC [auth CW]
IPR002583Small ribosomal subunit protein bS20Family
BD [auth DX],
CC [auth CX]
IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
BD [auth DX],
CC [auth CX]
IPR031414Small ribosomal subunit protein bTHXFamily
Q [auth A2],
UA [auth B2]
IPR028909Large ribosomal subunit protein bL21-likeFamily
Q [auth A2],
UA [auth B2]
IPR001787Large ribosomal subunit protein bL21Family
Q [auth A2],
UA [auth B2]
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
KC [auth DG],
LB [auth CG]
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
KC [auth DG],
LB [auth CG]
IPR002942RNA-binding S4 domainDomain
KC [auth DG],
LB [auth CG]
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
KC [auth DG],
LB [auth CG]
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
KC [auth DG],
LB [auth CG]
IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
KC [auth DG],
LB [auth CG]
IPR022801Small ribosomal subunit protein uS4Family
NC [auth DJ],
OB [auth CJ]
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
NC [auth DJ],
OB [auth CJ]
IPR000235Small ribosomal subunit protein uS7Family
NC [auth DJ],
OB [auth CJ]
IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
NC [auth DJ],
OB [auth CJ]
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
NC [auth DJ],
OB [auth CJ]
IPR023798Small ribosomal subunit protein uS7 domainDomain
H [auth AK],
LA [auth BK]
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
H [auth AK],
LA [auth BK]
IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
H [auth AK],
LA [auth BK]
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
H [auth AK],
LA [auth BK]
IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
H [auth AK],
LA [auth BK]
IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
H [auth AK],
LA [auth BK]
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
H [auth AK],
LA [auth BK]
IPR000244Large ribosomal subunit protein bL9Family
I [auth AM],
MA [auth BM]
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
I [auth AM],
MA [auth BM]
IPR005822Large ribosomal subunit protein uL13Family
I [auth AM],
MA [auth BM]
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
I [auth AM],
MA [auth BM]
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily