4V83

Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth AJ]SCOP2B SuperfamilyRibosomal protein S108098850 3001336 SCOP2B (2022-06-29)
KB [auth CJ]SCOP2B SuperfamilyRibosomal protein S108098850 3001336 SCOP2B (2022-06-29)
K [auth AK]SCOP2B SuperfamilyTranslational machinery components8098852 3000571 SCOP2B (2022-06-29)
LB [auth CK]SCOP2B SuperfamilyTranslational machinery components8098852 3000571 SCOP2B (2022-06-29)
L [auth AL]SCOP2B SuperfamilyNucleic acid-binding proteins8098824 3000135 SCOP2B (2022-06-29)
MB [auth CL]SCOP2B SuperfamilyNucleic acid-binding proteins8098824 3000135 SCOP2B (2022-06-29)
M [auth AM]SCOP2B SuperfamilyS13-like H2TH domain8098854 3000053 SCOP2B (2022-06-29)
NB [auth CM]SCOP2B SuperfamilyS13-like H2TH domain8098854 3000053 SCOP2B (2022-06-29)
N [auth AN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052583 3000068 SCOP2B (2022-06-29)
OB [auth CN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052583 3000068 SCOP2B (2022-06-29)
S [auth AS]SCOP2B SuperfamilyRibosomal protein S198098856 3000686 SCOP2B (2022-06-29)
TB [auth CS]SCOP2B SuperfamilyRibosomal protein S198098856 3000686 SCOP2B (2022-06-29)
B [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063836 3001397 SCOP2B (2022-06-29)
CBSCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063836 3001397 SCOP2B (2022-06-29)
T [auth AT]SCOP2B SuperfamilyRibosomal protein S208101559 3001362 SCOP2B (2022-06-29)
UB [auth CT]SCOP2B SuperfamilyRibosomal protein S208101559 3001362 SCOP2B (2022-06-29)
AC [auth DD]SCOP2B SuperfamilyTranslational proteins8089140 3000811 SCOP2B (2022-06-29)
Z [auth BD]SCOP2B SuperfamilyTranslational proteins8089140 3000811 SCOP2B (2022-06-29)
FA [auth BJ]SCOP2B SuperfamilyRibosomal protein L138099906 3001134 SCOP2B (2022-06-29)
GC [auth DJ]SCOP2B SuperfamilyRibosomal protein L138099906 3001134 SCOP2B (2022-06-29)
GA [auth BK]SCOP2B Superfamily50S Ribosomal protein L14-like8093738 3000433 SCOP2B (2022-06-29)
HC [auth DK]SCOP2B Superfamily50S Ribosomal protein L14-like8093738 3000433 SCOP2B (2022-06-29)
HA [auth BL]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8099902 3001045 SCOP2B (2022-06-29)
IC [auth DL]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8099902 3001045 SCOP2B (2022-06-29)
KA [auth BO]SCOP2B SuperfamilyTranslational machinery components8074014 3000571 SCOP2B (2022-06-29)
LC [auth DO]SCOP2B SuperfamilyTranslational machinery components8074014 3000571 SCOP2B (2022-06-29)
MA [auth BQ]SCOP2B SuperfamilyRibosomal protein L208093660 3000563 SCOP2B (2022-06-29)
NC [auth DQ]SCOP2B SuperfamilyRibosomal protein L208093660 3000563 SCOP2B (2022-06-29)
D [auth AD]SCOP2B SuperfamilyAlpha-L RNA-binding motif8093624 3001473 SCOP2B (2022-06-29)
EB [auth CD]SCOP2B SuperfamilyAlpha-L RNA-binding motif8093624 3001473 SCOP2B (2022-06-29)
NA [auth BR]SCOP2B Superfamilyl21p-like8093656 3002005 SCOP2B (2022-06-29)
OC [auth DR]SCOP2B Superfamilyl21p-like8093656 3002005 SCOP2B (2022-06-29)
OA [auth BS]SCOP2B SuperfamilyRibosomal protein L228099898 3001078 SCOP2B (2022-06-29)
PC [auth DS]SCOP2B SuperfamilyRibosomal protein L228099898 3001078 SCOP2B (2022-06-29)
PA [auth BT]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8099896 3000210 SCOP2B (2022-06-29)
QC [auth DT]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8099896 3000210 SCOP2B (2022-06-29)
UA [auth BY]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8076744 3000713 SCOP2B (2022-06-29)
VC [auth DY]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8076744 3000713 SCOP2B (2022-06-29)
VA [auth BZ]SCOP2B SuperfamilyRibosomal protein L30p/L7e8099900 3001378 SCOP2B (2022-06-29)
WC [auth DZ]SCOP2B SuperfamilyRibosomal protein L30p/L7e8099900 3001378 SCOP2B (2022-06-29)
XA [auth B2]SCOP2B SuperfamilyZn-binding ribosomal proteins8081579 3001320 SCOP2B (2022-06-29)
YC [auth D2]SCOP2B SuperfamilyZn-binding ribosomal proteins8081579 3001320 SCOP2B (2022-06-29)
YA [auth B3]SCOP2B SuperfamilyZn-binding ribosomal proteins8099892 3001320 SCOP2B (2022-06-29)
ZC [auth D3]SCOP2B SuperfamilyZn-binding ribosomal proteins8099892 3001320 SCOP2B (2022-06-29)
AB [auth B5]SCOP2B SuperfamilyL35p-like8099912 3000790 SCOP2B (2022-06-29)
BD [auth D5]SCOP2B SuperfamilyL35p-like8099912 3000790 SCOP2B (2022-06-29)
F [auth AF]SCOP2B SuperfamilyRibosomal protein S68098858 3001323 SCOP2B (2022-06-29)
GB [auth CF]SCOP2B SuperfamilyRibosomal protein S68098858 3001323 SCOP2B (2022-06-29)
G [auth AG]SCOP2B SuperfamilyRibosomal protein S78093626 3000799 SCOP2B (2022-06-29)
HB [auth CG]SCOP2B SuperfamilyRibosomal protein S78093626 3000799 SCOP2B (2022-06-29)
H [auth AH]SCOP2B SuperfamilyRibosomal protein S88098860 3000709 SCOP2B (2022-06-29)
IB [auth CH]SCOP2B SuperfamilyRibosomal protein S88098860 3000709 SCOP2B (2022-06-29)
I [auth AI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8093728 3000100 SCOP2B (2022-06-29)
JB [auth CI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8093728 3000100 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth AJ]Ribosomal_S10e4v83AJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
KB [auth CJ]Ribosomal_S10e4v83CJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
K [auth AK]Ribosomal_S11e4v83AK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
LB [auth CK]Ribosomal_S11e4v83CK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
L [auth AL]Ribosom_S12_S23e4v83AL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
MB [auth CL]Ribosom_S12_S23e4v83CL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
M [auth AM]Ribosomal_S13_1e4v83AM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
NB [auth CM]Ribosomal_S13_1e4v83CM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
N [auth AN]Ribosomal_S14e4v83AN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
OB [auth CN]Ribosomal_S14e4v83CN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
O [auth AO]Ribosomal_S15_1e4v83AO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
PB [auth CO]Ribosomal_S15_1e4v83CO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
P [auth AP]Ribosomal_S16_1e4v83AP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
QB [auth CP]Ribosomal_S16_1e4v83CP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
Q [auth AQ]Ribosomal_S17_1e4v83AQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
RB [auth CQ]Ribosomal_S17_1e4v83CQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
R [auth AR]Ribosomal_S18e4v83AR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
SB [auth CR]Ribosomal_S18e4v83CR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
S [auth AS]Ribosomal_S19e4v83AS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
TB [auth CS]Ribosomal_S19e4v83CS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
B [auth AB]Ribosomal_S2e4v83AB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
CBRibosomal_S2e4v83CB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
T [auth AT]Ribosomal_S20pe4v83AT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
UB [auth CT]Ribosomal_S20pe4v83CT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
Y [auth BC]Ribosomal_L2_1e4v83BC2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
Y [auth BC]Ribosomal_L2_Ce4v83BC1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
ZB [auth DC]Ribosomal_L2_1e4v83DC2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
ZB [auth DC]Ribosomal_L2_Ce4v83DC1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
AC [auth DD]Ribosomal_L3e4v83DD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
Z [auth BD]Ribosomal_L3e4v83BD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
AA [auth BE]Ribosomal_L4e4v83BE1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
BC [auth DE]Ribosomal_L4e4v83DE1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
BA [auth BF]Ribosomal_L5_Ce4v83BF1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
CC [auth DF]Ribosomal_L5_Ce4v83DF1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
CA [auth BG]Ribosomal_L6e4v83BG2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
CA [auth BG]Ribosomal_L6_1e4v83BG1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
DC [auth DG]Ribosomal_L6e4v83DG2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
DC [auth DG]Ribosomal_L6_1e4v83DG1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
C [auth AC]Ribosomal_S3_Ce4v83AC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
C [auth AC]KH_2_1e4v83AC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
DB [auth CC]Ribosomal_S3_Ce4v83CC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
DB [auth CC]KH_2_1e4v83CC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
DA [auth BH]Ribosomal_L9_Ne4v83BH2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
DA [auth BH]Ribosomal_L9_Ce4v83BH1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
EC [auth DH]Ribosomal_L9_Ne4v83DH2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
EC [auth DH]Ribosomal_L9_Ce4v83DH1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
FA [auth BJ]Ribosomal_L13e4v83BJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
GC [auth DJ]Ribosomal_L13e4v83DJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
GA [auth BK]Ribosomal_L14e4v83BK1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
HC [auth DK]Ribosomal_L14e4v83DK1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
HA [auth BL]Ribosomal_L27Ae4v83BL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
IC [auth DL]Ribosomal_L27Ae4v83DL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
IA [auth BM]Ribosomal_L16e4v83BM1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
JC [auth DM]Ribosomal_L16e4v83DM1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
JA [auth BN]Ribosomal_L17_1e4v83BN1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
KC [auth DN]Ribosomal_L17_1e4v83DN1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
KA [auth BO]Ribosomal_L18pe4v83BO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
LC [auth DO]Ribosomal_L18pe4v83DO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
LA [auth BP]Ribosomal_L19e4v83BP1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
MC [auth DP]Ribosomal_L19e4v83DP1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
MA [auth BQ]Ribosomal_L20e4v83BQ1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
NC [auth DQ]Ribosomal_L20e4v83DQ1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
D [auth AD]S4e4v83AD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
EB [auth CD]S4e4v83CD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
NA [auth BR]Ribosomal_L21pe4v83BR1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
OC [auth DR]Ribosomal_L21pe4v83DR1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
OA [auth BS]Ribosomal_L22e4v83BS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
PC [auth DS]Ribosomal_L22e4v83DS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
PA [auth BT]Ribosomal_L23_2e4v83BT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
QC [auth DT]Ribosomal_L23_2e4v83DT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
QA [auth BU]ribosomal_L24e4v83BU1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
RC [auth DU]ribosomal_L24e4v83DU1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
RA [auth BV]Ribosomal_L25pe4v83BV1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
RA [auth BV]Ribosomal_TL5_Ce4v83BV2 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
SC [auth DV]Ribosomal_L25pe4v83DV1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
SC [auth DV]Ribosomal_TL5_Ce4v83DV2 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
SA [auth BW]Ribosomal_L27e4v83BW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
TC [auth DW]Ribosomal_L27e4v83DW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
TA [auth BX]Ribosomal_L28e4v83BX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
UC [auth DX]Ribosomal_L28e4v83DX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
UA [auth BY]Ribosomal_L29e4v83BY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
VC [auth DY]Ribosomal_L29e4v83DY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
VA [auth BZ]Ribosomal_L30e4v83BZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
WC [auth DZ]Ribosomal_L30e4v83DZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
WA [auth B1]Ribosomal_L31e4v83B11 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
XC [auth D1]Ribosomal_L31e4v83D11 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
E [auth AE]Ribosomal_S5_Ce4v83AE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
E [auth AE]Ribosomal_S5e4v83AE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
FB [auth CE]Ribosomal_S5_Ce4v83CE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
FB [auth CE]Ribosomal_S5e4v83CE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
XA [auth B2]Ribosomal_L32pe4v83B21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
YC [auth D2]Ribosomal_L32pe4v83D21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
YA [auth B3]Ribosomal_L33e4v83B31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
ZC [auth D3]Ribosomal_L33e4v83D31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
AD [auth D4]Ribosomal_L34e4v83D41 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
ZA [auth B4]Ribosomal_L34e4v83B41 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
AB [auth B5]Ribosomal_L35pe4v83B51 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
BD [auth D5]Ribosomal_L35pe4v83D51 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
F [auth AF]Ribosomal_S6e4v83AF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
GB [auth CF]Ribosomal_S6e4v83CF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
G [auth AG]Ribosomal_S7_1e4v83AG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
HB [auth CG]Ribosomal_S7_1e4v83CG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
H [auth AH]Ribosomal_S8_Ne4v83AH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
H [auth AH]Ribosomal_S8_Ce4v83AH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
IB [auth CH]Ribosomal_S8_Ne4v83CH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
IB [auth CH]Ribosomal_S8_Ce4v83CH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
I [auth AI]Ribosomal_S9e4v83AI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
JB [auth CI]Ribosomal_S9e4v83CI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth AJ],
KB [auth CJ]
PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
K [auth AK],
LB [auth CK]
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
L [auth AL],
MB [auth CL]
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
M [auth AM],
NB [auth CM]
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
N [auth AN],
OB [auth CN]
PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
O [auth AO],
PB [auth CO]
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
P [auth AP],
QB [auth CP]
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
Q [auth AQ],
RB [auth CQ]
PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
R [auth AR],
SB [auth CR]
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
S [auth AS],
TB [auth CS]
PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
B [auth AB],
CB
PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
T [auth AT],
UB [auth CT]
PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
U [auth AU],
VB [auth CU]
PF1707030S ribosomal protein Thx (Thx)30S ribosomal protein Thx- Family
Y [auth BC],
ZB [auth DC]
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
Y [auth BC],
ZB [auth DC]
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
AC [auth DD],
Z [auth BD]
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
AA [auth BE],
BC [auth DE]
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
BA [auth BF],
CC [auth DF]
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
BA [auth BF],
CC [auth DF]
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
CA [auth BG],
DC [auth DG]
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
C [auth AC],
DB [auth CC]
PF07650KH domain (KH_2)KH domain- Domain
C [auth AC],
DB [auth CC]
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
DA [auth BH],
EC [auth DH]
PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
DA [auth BH],
EC [auth DH]
PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
EA [auth BI],
FC [auth DI]
PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
FA [auth BJ],
GC [auth DJ]
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
GA [auth BK],
HC [auth DK]
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
HA [auth BL],
IC [auth DL]
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
IA [auth BM],
JC [auth DM]
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
JA [auth BN],
KC [auth DN]
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
KA [auth BO],
LC [auth DO]
PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
LA [auth BP],
MC [auth DP]
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
MA [auth BQ],
NC [auth DQ]
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
D [auth AD],
EB [auth CD]
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth AD],
EB [auth CD]
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
NA [auth BR],
OC [auth DR]
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
OA [auth BS],
PC [auth DS]
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
PA [auth BT],
QC [auth DT]
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
QA [auth BU],
RC [auth DU]
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
QA [auth BU],
RC [auth DU]
PF00467KOW motif (KOW)KOW motif- Family
RA [auth BV],
SC [auth DV]
PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
RA [auth BV],
SC [auth DV]
PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
SA [auth BW],
TC [auth DW]
PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
TA [auth BX],
UC [auth DX]
PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
UA [auth BY],
VC [auth DY]
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
VA [auth BZ],
WC [auth DZ]
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
WA [auth B1],
XC [auth D1]
PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
E [auth AE],
FB [auth CE]
PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
E [auth AE],
FB [auth CE]
PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
XA [auth B2],
YC [auth D2]
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
YA [auth B3],
ZC [auth D3]
PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
AD [auth D4],
ZA [auth B4]
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
AB [auth B5],
BD [auth D5]
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
F [auth AF],
GB [auth CF]
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
G [auth AG],
HB [auth CG]
PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
H [auth AH],
IB [auth CH]
PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
I [auth AI],
JB [auth CI]
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AA],
BB [auth CA]
ribosomal RNA 16S---
J [auth AJ],
KB [auth CJ]
30S ribosomal protein S10
K [auth AK],
LB [auth CK]
30S ribosomal protein S11
L [auth AL],
MB [auth CL]
30S ribosomal protein S12
M [auth AM],
NB [auth CM]
30S ribosomal protein S13
N [auth AN],
OB [auth CN]
30S ribosomal protein S14 type Z
O [auth AO],
PB [auth CO]
30S ribosomal protein S15
P [auth AP],
QB [auth CP]
30S ribosomal protein S16
Q [auth AQ],
RB [auth CQ]
30S ribosomal protein S17
R [auth AR],
SB [auth CR]
30S ribosomal protein S18
S [auth AS],
TB [auth CS]
30S ribosomal protein S19
B [auth AB],
CB
30S ribosomal protein S2
T [auth AT],
UB [auth CT]
30S ribosomal protein S20
U [auth AU],
VB [auth CU]
30S ribosomal protein Thx -
V [auth AV],
WB [auth CV]
domain 3 of PSIC IGR IRES RNA---
W [auth BA],
XB [auth DA]
23S ribosomal RNA---
X [auth BB],
YB [auth DB]
5S ribosomal RNA---
Y [auth BC],
ZB [auth DC]
50S ribosomal protein L2
AC [auth DD],
Z [auth BD]
50S ribosomal protein L3
AA [auth BE],
BC [auth DE]
50S ribosomal protein L4
BA [auth BF],
CC [auth DF]
50S ribosomal protein L5
CA [auth BG],
DC [auth DG]
50S ribosomal protein L6
C [auth AC],
DB [auth CC]
30S ribosomal protein S3
DA [auth BH],
EC [auth DH]
50S ribosomal protein L9
EA [auth BI],
FC [auth DI]
50S ribosomal protein L10
FA [auth BJ],
GC [auth DJ]
50S ribosomal protein L13
GA [auth BK],
HC [auth DK]
50S ribosomal protein L14
HA [auth BL],
IC [auth DL]
50S ribosomal protein L15
IA [auth BM],
JC [auth DM]
50S ribosomal protein L16
JA [auth BN],
KC [auth DN]
50S ribosomal protein L17
KA [auth BO],
LC [auth DO]
50S ribosomal protein L18
LA [auth BP],
MC [auth DP]
50S ribosomal protein L19
MA [auth BQ],
NC [auth DQ]
50S ribosomal protein L20
D [auth AD],
EB [auth CD]
30S ribosomal protein S4
NA [auth BR],
OC [auth DR]
50S ribosomal protein L21
OA [auth BS],
PC [auth DS]
50S ribosomal protein L22
PA [auth BT],
QC [auth DT]
50S ribosomal protein L23
QA [auth BU],
RC [auth DU]
50S ribosomal protein L24
RA [auth BV],
SC [auth DV]
50S ribosomal protein L25
SA [auth BW],
TC [auth DW]
50S ribosomal protein L27
TA [auth BX],
UC [auth DX]
50S ribosomal protein L28
UA [auth BY],
VC [auth DY]
50S ribosomal protein L29
VA [auth BZ],
WC [auth DZ]
50S ribosomal protein L30
WA [auth B1],
XC [auth D1]
50S ribosomal protein L31
E [auth AE],
FB [auth CE]
30S ribosomal protein S5
XA [auth B2],
YC [auth D2]
50S ribosomal protein L32
YA [auth B3],
ZC [auth D3]
50S ribosomal protein L33
AD [auth D4],
ZA [auth B4]
50S ribosomal protein L34
AB [auth B5],
BD [auth D5]
50S ribosomal protein L35
F [auth AF],
GB [auth CF]
30S ribosomal protein S6
G [auth AG],
HB [auth CG]
30S ribosomal protein S7
H [auth AH],
IB [auth CH]
30S ribosomal protein S8
I [auth AI],
JB [auth CI]
30S ribosomal protein S9

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth AJ],
KB [auth CJ]
IPR001848Small ribosomal subunit protein uS10Family
J [auth AJ],
KB [auth CJ]
IPR027486Small ribosomal subunit protein uS10 domainDomain
J [auth AJ],
KB [auth CJ]
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
J [auth AJ],
KB [auth CJ]
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
K [auth AK],
LB [auth CK]
IPR001971Small ribosomal subunit protein uS11Family
K [auth AK],
LB [auth CK]
IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
K [auth AK],
LB [auth CK]
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth AK],
LB [auth CK]
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
L [auth AL],
MB [auth CL]
IPR006032Small ribosomal subunit protein uS12Family
L [auth AL],
MB [auth CL]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
L [auth AL],
MB [auth CL]
IPR005679Ribosomal protein uS12, bacterial-typeFamily
M [auth AM],
NB [auth CM]
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth AM],
NB [auth CM]
IPR001892Small ribosomal subunit protein uS13Family
M [auth AM],
NB [auth CM]
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth AM],
NB [auth CM]
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
M [auth AM],
NB [auth CM]
IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
N [auth AN],
OB [auth CN]
IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
N [auth AN],
OB [auth CN]
IPR001209Small ribosomal subunit protein uS14Family
N [auth AN],
OB [auth CN]
IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
N [auth AN],
OB [auth CN]
IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
O [auth AO],
PB [auth CO]
IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
O [auth AO],
PB [auth CO]
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth AO],
PB [auth CO]
IPR000589Small ribosomal subunit protein uS15Family
P [auth AP],
QB [auth CP]
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
P [auth AP],
QB [auth CP]
IPR000307Small ribosomal subunit protein bS16Family
Q [auth AQ],
RB [auth CQ]
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
Q [auth AQ],
RB [auth CQ]
IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Q [auth AQ],
RB [auth CQ]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth AQ],
RB [auth CQ]
IPR000266Small ribosomal subunit protein uS17Family
R [auth AR],
SB [auth CR]
IPR001648Small ribosomal subunit protein bS18Family
R [auth AR],
SB [auth CR]
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
R [auth AR],
SB [auth CR]
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
S [auth AS],
TB [auth CS]
IPR002222Small ribosomal subunit protein uS19Family
S [auth AS],
TB [auth CS]
IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
S [auth AS],
TB [auth CS]
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth AS],
TB [auth CS]
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
B [auth AB],
CB
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth AB],
CB
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth AB],
CB
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth AB],
CB
IPR001865Small ribosomal subunit protein uS2Family
T [auth AT],
UB [auth CT]
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
T [auth AT],
UB [auth CT]
IPR002583Small ribosomal subunit protein bS20Family
U [auth AU],
VB [auth CU]
IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
U [auth AU],
VB [auth CU]
IPR031414Small ribosomal subunit protein bTHXFamily
Y [auth BC],
ZB [auth DC]
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
Y [auth BC],
ZB [auth DC]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Y [auth BC],
ZB [auth DC]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth BC],
ZB [auth DC]
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
Y [auth BC],
ZB [auth DC]
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
Y [auth BC],
ZB [auth DC]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Y [auth BC],
ZB [auth DC]
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
Y [auth BC],
ZB [auth DC]
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
Y [auth BC],
ZB [auth DC]
IPR002171Large ribosomal subunit protein uL2Family
AC [auth DD],
Z [auth BD]
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
AC [auth DD],
Z [auth BD]
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
AC [auth DD],
Z [auth BD]
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
AC [auth DD],
Z [auth BD]
IPR000597Large ribosomal subunit protein uL3Family
AA [auth BE],
BC [auth DE]
IPR013005Large ribosomal subunit protein uL4-likeFamily
AA [auth BE],
BC [auth DE]
IPR002136Large ribosomal subunit protein uL4Family
AA [auth BE],
BC [auth DE]
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
BA [auth BF],
CC [auth DF]
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
BA [auth BF],
CC [auth DF]
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
BA [auth BF],
CC [auth DF]
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
BA [auth BF],
CC [auth DF]
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
BA [auth BF],
CC [auth DF]
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
BA [auth BF],
CC [auth DF]
IPR002132Large ribosomal subunit protein uL5Family
CA [auth BG],
DC [auth DG]
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
CA [auth BG],
DC [auth DG]
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
CA [auth BG],
DC [auth DG]
IPR000702Large ribosomal subunit protein uL6-likeFamily
CA [auth BG],
DC [auth DG]
IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
C [auth AC],
DB [auth CC]
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth AC],
DB [auth CC]
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth AC],
DB [auth CC]
IPR004087K Homology domainDomain
C [auth AC],
DB [auth CC]
IPR004044K Homology domain, type 2Domain
C [auth AC],
DB [auth CC]
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth AC],
DB [auth CC]
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth AC],
DB [auth CC]
IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
C [auth AC],
DB [auth CC]
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
DA [auth BH],
EC [auth DH]
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
DA [auth BH],
EC [auth DH]
IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
DA [auth BH],
EC [auth DH]
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
DA [auth BH],
EC [auth DH]
IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
DA [auth BH],
EC [auth DH]
IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
DA [auth BH],
EC [auth DH]
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
DA [auth BH],
EC [auth DH]
IPR000244Large ribosomal subunit protein bL9Family
EA [auth BI],
FC [auth DI]
IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
EA [auth BI],
FC [auth DI]
IPR001790Large ribosomal subunit protein uL10Family
EA [auth BI],
FC [auth DI]
IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
EA [auth BI],
FC [auth DI]
IPR022973Large ribosomal subunit protein uL10, bacterialFamily
FA [auth BJ],
GC [auth DJ]
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
FA [auth BJ],
GC [auth DJ]
IPR005822Large ribosomal subunit protein uL13Family
FA [auth BJ],
GC [auth DJ]
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
FA [auth BJ],
GC [auth DJ]
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
GA [auth BK],
HC [auth DK]
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
GA [auth BK],
HC [auth DK]
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
GA [auth BK],
HC [auth DK]
IPR000218Large ribosomal subunit protein uL14Family
GA [auth BK],
HC [auth DK]
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
HA [auth BL],
IC [auth DL]
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
HA [auth BL],
IC [auth DL]
IPR021131Large ribosomal subunit protein uL15/eL18Domain
HA [auth BL],
IC [auth DL]
IPR030878Large ribosomal subunit protein uL15Family
HA [auth BL],
IC [auth DL]
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
HA [auth BL],
IC [auth DL]
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
IA [auth BM],
JC [auth DM]
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IA [auth BM],
JC [auth DM]
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
IA [auth BM],
JC [auth DM]
IPR016180Large ribosomal subunit protein uL16 domainDomain
IA [auth BM],
JC [auth DM]
IPR047873Large ribosomal subunit protein uL16Family
JA [auth BN],
KC [auth DN]
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
JA [auth BN],
KC [auth DN]
IPR000456Large ribosomal subunit protein bL17Family
KA [auth BO],
LC [auth DO]
IPR005484Large ribosomal subunit protein uL18Family
KA [auth BO],
LC [auth DO]
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
LA [auth BP],
MC [auth DP]
IPR001857Large ribosomal subunit protein bL19Family
LA [auth BP],
MC [auth DP]
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
LA [auth BP],
MC [auth DP]
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
LA [auth BP],
MC [auth DP]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth BQ],
NC [auth DQ]
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
MA [auth BQ],
NC [auth DQ]
IPR005813Large ribosomal subunit protein bL20Family
D [auth AD],
EB [auth CD]
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth AD],
EB [auth CD]
IPR002942RNA-binding S4 domainDomain
D [auth AD],
EB [auth CD]
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth AD],
EB [auth CD]
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth AD],
EB [auth CD]
IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
D [auth AD],
EB [auth CD]
IPR022801Small ribosomal subunit protein uS4Family
NA [auth BR],
OC [auth DR]
IPR028909Large ribosomal subunit protein bL21-likeFamily
NA [auth BR],
OC [auth DR]
IPR001787Large ribosomal subunit protein bL21Family
NA [auth BR],
OC [auth DR]
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
OA [auth BS],
PC [auth DS]
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
OA [auth BS],
PC [auth DS]
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
OA [auth BS],
PC [auth DS]
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
OA [auth BS],
PC [auth DS]
IPR001063Large ribosomal subunit protein uL22Family
OA [auth BS],
PC [auth DS]
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
PA [auth BT],
QC [auth DT]
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
PA [auth BT],
QC [auth DT]
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
PA [auth BT],
QC [auth DT]
IPR013025Large ribosomal subunit protein uL23-likeFamily
QA [auth BU],
RC [auth DU]
IPR003256Large ribosomal subunit protein uL24Family
QA [auth BU],
RC [auth DU]
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
QA [auth BU],
RC [auth DU]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
QA [auth BU],
RC [auth DU]
IPR005824KOWDomain
QA [auth BU],
RC [auth DU]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
QA [auth BU],
RC [auth DU]
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
RA [auth BV],
SC [auth DV]
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
RA [auth BV],
SC [auth DV]
IPR001021Ribosomal protein bL25, long-formFamily
RA [auth BV],
SC [auth DV]
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
RA [auth BV],
SC [auth DV]
IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
RA [auth BV],
SC [auth DV]
IPR020057Large ribosomal subunit protein bL25, beta domainDomain
RA [auth BV],
SC [auth DV]
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
SA [auth BW],
TC [auth DW]
IPR001684Large ribosomal subunit protein bL27Family
SA [auth BW],
TC [auth DW]
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
TA [auth BX],
UC [auth DX]
IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
TA [auth BX],
UC [auth DX]
IPR026569Large ribosomal subunit protein bL28Family
TA [auth BX],
UC [auth DX]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
UA [auth BY],
VC [auth DY]
IPR001854Large ribosomal subunit protein uL29Family
UA [auth BY],
VC [auth DY]
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
UA [auth BY],
VC [auth DY]
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
VA [auth BZ],
WC [auth DZ]
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
VA [auth BZ],
WC [auth DZ]
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
VA [auth BZ],
WC [auth DZ]
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
VA [auth BZ],
WC [auth DZ]
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
WA [auth B1],
XC [auth D1]
IPR002150Large ribosomal subunit protein bL31 type A/BFamily
WA [auth B1],
XC [auth D1]
IPR027491Large ribosomal subunit protein bL31 type AFamily
WA [auth B1],
XC [auth D1]
IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
WA [auth B1],
XC [auth D1]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
E [auth AE],
FB [auth CE]
IPR000851Small ribosomal subunit protein uS5Family
E [auth AE],
FB [auth CE]
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth AE],
FB [auth CE]
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth AE],
FB [auth CE]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth AE],
FB [auth CE]
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth AE],
FB [auth CE]
IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
E [auth AE],
FB [auth CE]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
XA [auth B2],
YC [auth D2]
IPR002677Large ribosomal subunit protein bL32Family
XA [auth B2],
YC [auth D2]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XA [auth B2],
YC [auth D2]
IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
YA [auth B3],
ZC [auth D3]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
YA [auth B3],
ZC [auth D3]
IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
YA [auth B3],
ZC [auth D3]
IPR001705Large ribosomal subunit protein bL33Family
YA [auth B3],
ZC [auth D3]
IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
AD [auth D4],
ZA [auth B4]
IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
AD [auth D4],
ZA [auth B4]
IPR000271Large ribosomal subunit protein bL34Family
AB [auth B5],
BD [auth D5]
IPR021137Large ribosomal subunit protein bL35-likeFamily
AB [auth B5],
BD [auth D5]
IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
AB [auth B5],
BD [auth D5]
IPR001706Large ribosomal subunit protein bL35Family
AB [auth B5],
BD [auth D5]
IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
F [auth AF],
GB [auth CF]
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth AF],
GB [auth CF]
IPR000529Small ribosomal subunit protein bS6Family
F [auth AF],
GB [auth CF]
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth AF],
GB [auth CF]
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth AF],
GB [auth CF]
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
G [auth AG],
HB [auth CG]
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth AG],
HB [auth CG]
IPR000235Small ribosomal subunit protein uS7Family
G [auth AG],
HB [auth CG]
IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
G [auth AG],
HB [auth CG]
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth AG],
HB [auth CG]
IPR023798Small ribosomal subunit protein uS7 domainDomain
H [auth AH],
IB [auth CH]
IPR000630Small ribosomal subunit protein uS8Family
H [auth AH],
IB [auth CH]
IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
H [auth AH],
IB [auth CH]
IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
I [auth AI],
JB [auth CI]
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
I [auth AI],
JB [auth CI]
IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
I [auth AI],
JB [auth CI]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth AI],
JB [auth CI]
IPR000754Small ribosomal subunit protein uS9Family
I [auth AI],
JB [auth CI]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily